RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 REG1AP05451 166 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 FAM228BP0C875 321 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 RBM3P98179 157 aaKnown RBP-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 STX5Q13190 355 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 PMS2P3Q13401 168 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 Q6ZQT0 140 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 HIST2H3AQ71DI3 136 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 LCA10Q71F78 164 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 SLC30A7Q8NEW0 376 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 TMEM106AQ96A25 262 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 PRRT1Q99946 306 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 CHMP5Q9NZZ3 219 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 CKLFQ9UBR5 152 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 MAP1AP78559 2803 aaPredicted RBP-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 TRRAPQ9Y4A5 3859 aa-0.14□□□□□ -2.43
CCDC7-211ENST00000638889 WDR87Q6ZQQ6 2873 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 ANKRD11Q6UB99 2663 aaPredicted RBP-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 COL6A3P12111 3177 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 USF3Q68DE3 2245 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 AKAP9Q99996 3911 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 TRBV6-8A0A0A6YYG3 113 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 GOLGA8MH3BSY2 632 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 BIRC5O15392 142 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 HPGDSO60760 199 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 TNFP01375 233 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 HTR1AP08908 422 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 TPM1P09493 284 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 PET100P0DJ07 73 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 SPI1P17947 270 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 RNASE4P34096 147 aaKnown RBP-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 MAP2K4P45985 399 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 CDC34P49427 236 aaPredicted RBP-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 EFNA4P52798 201 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 FABP9Q0Z7S8 132 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 SPINK9Q5DT21 86 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 IBA57Q5T440 356 aaKnown RBP-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 SDHAF4Q5VUM1 108 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 C10orf99Q6UWK7 81 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 DEFB128Q7Z7B8 93 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 PHF13Q86YI8 300 aaPredicted RBP-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 EXOC3-AS1Q8N2X6 119 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 TMEM161BQ8NDZ6 487 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 OR11H6Q8NGC7 330 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 BORCS5Q969J3 196 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 ROPN1LQ96C74 230 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 SMIM19Q96E16 107 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 FKBP14Q9NWM8 211 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 JPT1Q9UK76 154 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 DKKL1Q9UK85 242 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 TEX15Q9BXT5 2789 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 TACC2O95359 2948 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 KIAA1549Q9HCM3 1950 aa-0.15□□□□□ -2.43
CCDC7-211ENST00000638889 SPTBP11277 2137 aa-0.16□□□□□ -2.43
CCDC7-211ENST00000638889 NIPBLQ6KC79 2804 aaeCLIP-0.16□□□□□ -2.43
CCDC7-211ENST00000638889 CFAP46Q8IYW2 2715 aa-0.16□□□□□ -2.43
CCDC7-211ENST00000638889 A0A0D9SG42 100 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 OR2T8A6NH00 312 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 CFDP00746 253 aaPredicted RBP-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 PRM2P04554 102 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 IL3P08700 152 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 SPRR2DP22532 72 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 HOXA6P31267 233 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 ZNF137PP52743 207 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 FXYD6P3P58550 94 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 CNBPP62633 177 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 QRFPP83859 136 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 KCNJ8Q15842 424 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 KLK9Q2XQG4 91 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 C12orf74Q32Q52 190 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 C6orf52Q5T4I8 152 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 Q6ZS92 163 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 OOSP2Q86WS3 158 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 RASSF5Q8WWW0 418 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 ZC2HC1AQ96GY0 325 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 TSPAN32Q96QS1 320 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 FAM103A1Q9BTL3 118 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 NDEL1Q9GZM8 345 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 EFCAB1Q9HAE3 211 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 TREM1Q9NP99 234 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 POLR1DQ9Y2S0 133 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 UTP20O75691 2785 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 FREM3P0C091 2139 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 ZNF106Q9H2Y7 1883 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 DOCK3Q8IZD9 2030 aa-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 PRRC2CQ9Y520 2896 aaKnown RBP-0.16□□□□□ -2.44
CCDC7-211ENST00000638889 MAST2Q6P0Q8 1798 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 DNAH10Q8IVF4 4471 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 MCM3APO60318 1980 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 TRAV1-1A0A0B4J248 108 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 LOC107984156A0A0G2JMH3 177 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 LOC730098B7Z3J9 87 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 M0R378 163 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 YKT6O15498 198 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 TIMM17BO60830 172 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 NDUFS6O75380 124 aaKnown RBP-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 ZNF682O95780 498 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 CD2P06729 351 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 CRYGAP11844 174 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 MIFP14174 115 aa-0.17□□□□□ -2.44
CCDC7-211ENST00000638889 KCNE1P15382 129 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms