RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MRPL14Q6P1L8 145 aaKnown RBP15.4■□□□□ 0.06
SCARB2-213ENST00000638680 OR5AN1Q8NGI8 311 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 ORAOV1Q8WV07 137 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 GTF3AQ92664 365 aaKnown RBP15.4■□□□□ 0.06
SCARB2-213ENST00000638680 WDR83OSQ9Y284 106 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 TNFSF13O75888 250 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 PLAURQ03405 335 aa15.4■□□□□ 0.06
SCARB2-213ENST00000638680 MRPS18CQ9Y3D5 142 aaKnown RBP15.4■□□□□ 0.06
SCARB2-213ENST00000638680 NYNRINQ9P2P1 1898 aaKnown RBP15.4■□□□□ 0.06
SCARB2-213ENST00000638680 FABP5P3A8MUU1 101 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 TMEM95Q3KNT9 176 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 TRAV8-2A0A0B4J237 113 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 TIMP3P35625 211 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 FGFBP3Q8TAT2 258 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 H3BRM9 83 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 RFNGQ9Y644 331 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 A0A1B0GW64 132 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 DUTP33316 252 aaKnown RBP15.39■□□□□ 0.05
SCARB2-213ENST00000638680 CHCHD1Q96BP2 118 aaKnown RBP15.39■□□□□ 0.05
SCARB2-213ENST00000638680 VCX2Q9H322 139 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 DPM2O94777 84 aa15.39■□□□□ 0.05
SCARB2-213ENST00000638680 TRAV5A0A0B4J249 113 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 TSKUQ8WUA8 353 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 DUX3Q96PT4 197 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 COLQQ9Y215 455 aaPredicted RBP15.38■□□□□ 0.05
SCARB2-213ENST00000638680 C9orf106Q8NAJ2 232 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 VKORC1Q9BQB6 163 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 PSG8Q9UQ74 426 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 PSME4Q14997 1843 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 IGHV4-39P01824 125 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 PRCDQ00LT1 54 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 ZNF585BQ52M93 769 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 CACNA1IQ9P0X4 2223 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 MST1P26927 711 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 HGFACQ04756 655 aa15.38■□□□□ 0.05
SCARB2-213ENST00000638680 EVI2AP22794 236 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 TREML4Q6UXN2 200 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
SCARB2-213ENST00000638680 LHFPL4Q7Z7J7 247 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 RNF125Q96EQ8 232 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 PRB4P10163 310 aaPredicted RBP15.37■□□□□ 0.05
SCARB2-213ENST00000638680 BEND2Q8NDZ0 799 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 CCL19Q99731 98 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 CHD5Q8TDI0 1954 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 IGLV3-32A0A0A0MS00 114 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 PAX1P15863 534 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 SPATA31B1PQ5VZV4 182 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 IGLV3-12A0A075B6K2 115 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 C17orf100A8MU93 164 aa15.37■□□□□ 0.05
SCARB2-213ENST00000638680 PPIFP30405 207 aaKnown RBP15.36■□□□□ 0.05
SCARB2-213ENST00000638680 SRSF1Q07955 248 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCARB2-213ENST00000638680 NUDT10Q8NFP7 164 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 CRYGSP22914 178 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 PRR31Q5SQ13 230 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 PVRIGQ6DKI7 326 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 ASCL2Q99929 193 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 TPRP12270 2363 aaKnown RBP15.36■□□□□ 0.05
SCARB2-213ENST00000638680 FAM90A9PA6NNJ1 464 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 NBR2O15453 112 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 JMJD8Q96S16 334 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 RALGAPA2Q2PPJ7 1873 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 HOXA3O43365 443 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-213ENST00000638680 GLMPQ8WWB7 406 aa15.36■□□□□ 0.05
SCARB2-213ENST00000638680 CRIM1Q9NZV1 1036 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 TOMM7Q9P0U1 55 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 IGKCP01834 107 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 GZMBP10144 247 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 NUTF2P61970 127 aaKnown RBP15.35■□□□□ 0.05
SCARB2-213ENST00000638680 IGKV1-27A0A075B6S5 117 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 TRAV1-1A0A0B4J248 108 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 IGLV3-19P01714 112 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 ST20Q9HBF5 79 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 DOCK4Q8N1I0 1966 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 ACTL10Q5JWF8 245 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 OR10W1Q8NGF6 305 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 MESP1Q9BRJ9 268 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 FOXL1Q12952 345 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 C1orf194Q5T5A4 169 aa15.35■□□□□ 0.05
SCARB2-213ENST00000638680 ITLN2Q8WWU7 325 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-213ENST00000638680 BRCA1P38398 1863 aaKnown RBP15.34■□□□□ 0.05
SCARB2-213ENST00000638680 ATP5L2Q7Z4Y8 100 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 IGKV3D-20A0A0C4DH25 116 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 A0A0G2JLM5 398 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 IGHV3-11P01762 117 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 GGTLC1Q9BX51 225 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 NXT2Q9NPJ8 142 aaKnown RBP15.34■□□□□ 0.05
SCARB2-213ENST00000638680 TRBV7-9A0A0J9YWB2 115 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 SRSF7Q16629 238 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCARB2-213ENST00000638680 CHTOPQ9Y3Y2 248 aaKnown RBP15.34■□□□□ 0.05
SCARB2-213ENST00000638680 A0A0G2JMZ2 1700 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 LRRC37A2A6NM11 1700 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 PDCD11Q14690 1871 aaKnown RBP15.34■□□□□ 0.05
SCARB2-213ENST00000638680 LINC01551Q86U37 167 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 SPOCK3Q9BQ16 436 aa15.34■□□□□ 0.05
SCARB2-213ENST00000638680 SIPA1L1O43166 1804 aa15.33■□□□□ 0.05
SCARB2-213ENST00000638680 SIGMAR1Q99720 223 aa15.33■□□□□ 0.05
SCARB2-213ENST00000638680 SCN10AQ9Y5Y9 1956 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 CABIN1Q9Y6J0 2220 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 CNTFRP26992 372 aa15.33■□□□□ 0.04
SCARB2-213ENST00000638680 PYY3Q5JQD4 70 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms