RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 DLX6P56179 175 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 HIST1H1AQ02539 215 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 KIR3DL3Q8N743 410 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 C1orf147Q96MC9 270 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 RNASE7Q9H1E1 156 aaKnown RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 CBLN4Q9NTU7 201 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 MBD3L4A6NDZ8 208 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 MBD3L3A6NE82 208 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 MBD3L5A6NJ08 208 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 LY6HO94772 140 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 PRCDQ00LT1 54 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 CENPVQ7Z7K6 275 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 MBD3L2Q8NHZ7 208 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 OR4C46A6NHA9 309 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 EFNB3Q15768 340 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 SRSF7Q16629 238 aaKnown RBP eCLIP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 CLEC19AQ6UXS0 136 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 Q6ZRM9 215 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 RPP25LQ8N5L8 163 aaKnown RBP11.87□□□□□ -0.51
SCARB2-208ENST00000638372 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 IL36BQ9NZH7 164 aa11.87□□□□□ -0.51
SCARB2-208ENST00000638372 TGFAP01135 160 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 HEPN1Q6WQI6 88 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 LHFPL4Q7Z7J7 247 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 GNG5P63218 68 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 IGKV1D-17A0A075B6S4 117 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 SIAH2O43255 324 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 MYOD1P15172 320 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 RAB9AP51151 201 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 CDC42EP3Q9UKI2 254 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 OTOGLQ3ZCN5 2332 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 HBBP68871 147 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 TANC1Q9C0D5 1861 aa11.86□□□□□ -0.51
SCARB2-208ENST00000638372 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 TMEM183AQ8IXX5 376 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 DDTP30046 118 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 RSPO1Q2MKA7 263 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-208ENST00000638372 COLCA1Q6ZS62 124 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 SMAD7O15105 426 aaKnown RBP11.85□□□□□ -0.51
SCARB2-208ENST00000638372 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 FAM74A4Q5TZK3 123 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 FRMPD3Q5JV73 1810 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 CD5P06127 495 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 THBDP07204 575 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 SOD3P08294 240 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 HINT1P49773 126 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-208ENST00000638372 HERVK_113P61574 105 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 TCF23Q7RTU1 214 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 Q9H3A6 140 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 ZFP30Q9Y2G7 519 aa11.85□□□□□ -0.51
SCARB2-208ENST00000638372 A0A087WWC5 75 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 DPRXA6NFQ7 191 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 TMEM178BH3BS89 294 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 LINC00527Q9UJ94 153 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 IGKV1-6A0A0C4DH72 117 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 HLA-DRB1P01911 266 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 GGTLC1Q9BX51 225 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 M0QZK8 103 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
SCARB2-208ENST00000638372 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 OCC1Q8TAD7 63 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 NEUROG1Q92886 237 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 AP5S1Q9NUS5 200 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 RPL24P83731 157 aaKnown RBP11.84□□□□□ -0.51
SCARB2-208ENST00000638372 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 DDB2Q92466 427 aa11.84□□□□□ -0.51
SCARB2-208ENST00000638372 ZNF503-AS2A6NEH8 195 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 DLX1P56177 255 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 GPR82Q96P67 336 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 MAP1LC3AQ9H492 121 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 TRAV5A0A0B4J249 113 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
SCARB2-208ENST00000638372 IGF2RP11717 2491 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 TRBV9A0A0B4J1U6 114 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 FAM209BQ5JX69 171 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 TUBA4BQ9H853 241 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 CCDC168Q8NDH2 2452 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 HIGD1CA8MV81 97 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 RPLP1P05386 114 aaKnown RBP11.83□□□□□ -0.52
SCARB2-208ENST00000638372 FOLR2P14207 255 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 FAM19A2Q8N3H0 131 aa11.83□□□□□ -0.52
SCARB2-208ENST00000638372 M0R381 172 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 ADIPOQQ15848 244 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 PRR30Q53SZ7 412 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-208ENST00000638372 TMEM136Q6ZRR5 245 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 LOC105371267A0A1B0GV96 52 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 TCRBV4S1A1TA0A5B7 111 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 IGHV1-8P0DP01 117 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 OR10AG1Q8NH19 301 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 RNF125Q96EQ8 232 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 REG4Q9BYZ8 158 aa11.82□□□□□ -0.52
SCARB2-208ENST00000638372 TRBV6-6A0A0A6YYG2 114 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms