RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 PLPPR1Q8TBJ4 325 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 RASL10AQ92737 203 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 DLL3Q9NYJ7 618 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 GAGE12JA6NER3 117 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 IGLV3-25P01717 112 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 PSG4Q00888 419 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 GAGE1Q13065 139 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 GAGE4Q13068 117 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 GAGE5Q13069 117 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 GAGE6Q13070 117 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 ERCC8Q13216 396 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 OR5P3Q8WZ94 311 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 IFI27L2Q9H2X8 130 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 IGFBP2P18065 325 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 FOXL1Q12952 345 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 ZNF826PQ6ZT77 177 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 GLMPQ8WWB7 406 aa11.11□□□□□ -0.63
UBE3A-228ENST00000638155 RHOGP84095 191 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 KLHDC2Q9Y2U9 406 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 IGLV3-16A0A075B6K0 115 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 LILRA1O75019 489 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
UBE3A-228ENST00000638155 A0A1W2PRX2 142 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 CHKB-CPT1BH3BT56 60 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 STPG1Q5TH74 334 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 CLEC19AQ6UXS0 136 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 NDUFS5O43920 106 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 ZNRF1Q8ND25 227 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 DSCR8Q96T75 97 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 SBF1O95248 1867 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 TRBV20-1A0A075B6N2 111 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 LHX2P50458 406 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 KLF17Q5JT82 389 aaPredicted RBP11.1□□□□□ -0.63
UBE3A-228ENST00000638155 GP6Q9HCN6 339 aa11.1□□□□□ -0.63
UBE3A-228ENST00000638155 C9JAW5 83 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 CEACAM8P31997 349 aaPredicted RBP11.09□□□□□ -0.63
UBE3A-228ENST00000638155 KIR3DS1Q14943 382 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 RAMP1O60894 148 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 IGHG3P01860 377 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 QSER1Q2KHR3 1735 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 IGKV1D-33P01593 117 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 IGKV1-33P01594 117 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 PILRBQ9UKJ0 227 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
UBE3A-228ENST00000638155 S4R3C0 116 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
UBE3A-228ENST00000638155 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
UBE3A-228ENST00000638155 UPK3AO75631 287 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 RPL39P5Q59GN2 51 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 ASPHD2Q6ICH7 369 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 FAM214BQ7L5A3 538 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 PTPRFP10586 1907 aa11.09□□□□□ -0.63
UBE3A-228ENST00000638155 IGHV1-69-2A0A0G2JMI3 117 aa11.08□□□□□ -0.63
UBE3A-228ENST00000638155 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.63
UBE3A-228ENST00000638155 UBE2CO00762 179 aa11.08□□□□□ -0.63
UBE3A-228ENST00000638155 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
UBE3A-228ENST00000638155 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 UBE2V1Q13404 147 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 OSR1Q8TAX0 266 aaPredicted RBP11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BKO60814 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BJP06899 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BOP23527 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BBP33778 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BDP58876 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BCP62807 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST2H2BEQ16778 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BHQ93079 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BNQ99877 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 HIST1H2BMQ99879 126 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 SPAARA0A1B0GVQ0 90 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 NPIPB13A6NJU9 1138 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 IQCF6A8MYZ5 107 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 EREGO14944 169 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 TNFSF13O75888 250 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 A0A1W2PRE2 83 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 SRP19P09132 144 aaKnown RBP11.08□□□□□ -0.64
UBE3A-228ENST00000638155 TFF2Q03403 129 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 PSME4Q14997 1843 aa11.08□□□□□ -0.64
UBE3A-228ENST00000638155 TM4SF5O14894 197 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 Q6ZS52 159 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 Q96M66 194 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 XIRP1Q702N8 1843 aaKnown RBP11.07□□□□□ -0.64
UBE3A-228ENST00000638155 GNG5P63218 68 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 LOC105371267A0A1B0GV96 52 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 DEFB121Q5J5C9 76 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 TMEM144Q7Z5S9 345 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 NAA38Q9BRA0 125 aaKnown RBP11.07□□□□□ -0.64
UBE3A-228ENST00000638155 PPP1R3EQ9H7J1 279 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 RPL34P49207 117 aaKnown RBP11.07□□□□□ -0.64
UBE3A-228ENST00000638155 PSG1P11464 419 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 C9orf40Q8IXQ3 194 aa11.07□□□□□ -0.64
UBE3A-228ENST00000638155 ZP4Q12836 540 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms