RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FNDC4Q9H6D8 234 aaPredicted RBP12.1□□□□□ -0.47
CLN6-219ENST00000637329 THYN1Q9P016 225 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 PFDN2Q9UHV9 154 aa12.1□□□□□ -0.47
CLN6-219ENST00000637329 IGLV11-55A0A075B6I3 123 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 IGF1P05019 195 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 Q6ZRG5 221 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 THAP8Q8NA92 274 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 LFNGQ8NES3 379 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 DMRT1Q9Y5R6 373 aa12.09□□□□□ -0.47
CLN6-219ENST00000637329 I3L2K1 104 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 AGPAT2O15120 278 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 MT-CO2P00403 227 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 SRP14P37108 136 aaKnown RBP12.08□□□□□ -0.48
CLN6-219ENST00000637329 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
CLN6-219ENST00000637329 C19orf54Q5BKX5 351 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 SLC35E3Q7Z769 313 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 LYPD6BQ8NI32 183 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
CLN6-219ENST00000637329 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
CLN6-219ENST00000637329 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.48
CLN6-219ENST00000637329 COL6A5A8TX70 2615 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 TSPAN15O95858 294 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 RND2P52198 227 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 SELENOTP62341 195 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
CLN6-219ENST00000637329 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 UNQ5815/PRO19632Q6UWF5 114 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 IL34Q6ZMJ4 242 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 C19orf35Q6ZS72 473 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 ACY3Q96HD9 319 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 SMR3AQ99954 134 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 YAE1D1Q9NRH1 226 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
CLN6-219ENST00000637329 IGKV1OR2-108A0A075B7D4 117 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 H3BUA1 57 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 K7EIM0 57 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 BRI3O95415 125 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 M6PRP20645 277 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 ELLP55199 621 aaPredicted RBP12.06□□□□□ -0.48
CLN6-219ENST00000637329 PRR20EP86478 221 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 PRR20CP86479 221 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 PRR20DP86480 221 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 PRR20BP86481 221 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 PRR20AP86496 221 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 ACSM6Q6P461 480 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 COMMD7Q86VX2 200 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 OR4X1Q8NH49 305 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 OR2T6Q8NHC8 308 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 FANCD2OSQ96PS1 177 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 RFNGQ9Y644 331 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 NBEAL1Q6ZS30 2694 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 NSD1Q96L73 2696 aaPredicted RBP12.06□□□□□ -0.48
CLN6-219ENST00000637329 ABCA1O95477 2261 aa12.06□□□□□ -0.48
CLN6-219ENST00000637329 TCRBV4S1A1TA0A5B7 111 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 AP4M1O00189 453 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 HOXA3O43365 443 aaPredicted RBP12.05□□□□□ -0.48
CLN6-219ENST00000637329 ATP6V1G1O75348 118 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 SCGB2A1O75556 95 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 HBE1P02100 147 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 B2MP61769 119 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 EIF4E3Q8N5X7 224 aaKnown RBP12.05□□□□□ -0.48
CLN6-219ENST00000637329 STPG3Q8N7X2 389 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 NPIPB3Q92617 1050 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 TRGV9Q99603 122 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 RPRMQ9NS64 109 aa12.05□□□□□ -0.48
CLN6-219ENST00000637329 TRBV9A0A0B4J1U6 114 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 TRAV1-1A0A0B4J248 108 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 RAB19A4D1S5 217 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 SH2D7A6NKC9 451 aaPredicted RBP12.04□□□□□ -0.48
CLN6-219ENST00000637329 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 FABP1P07148 127 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 H2AFB1P0C5Y9 115 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 OR10J1P30954 320 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 FCGR2BP31994 310 aaPredicted RBP12.04□□□□□ -0.48
CLN6-219ENST00000637329 FHITP49789 147 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 RAB2AP61019 212 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 C9orf152Q5JTZ5 239 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 CYP2G1PQ6ZSU1 146 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 IL17RELQ6ZVW7 336 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 SLC7A5P1Q8MH63 180 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 SIGLECL1Q8N7X8 197 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 VN1R17PQ8TDU5 208 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 C19orf24Q9BVV8 132 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 NPFFR1Q9GZQ6 430 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 SLC39A9Q9NUM3 307 aa12.04□□□□□ -0.48
CLN6-219ENST00000637329 IGKV1D-37A0A075B6S9 117 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 CLN5O75503 358 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 NPBWR1P48145 328 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 MLANAQ16655 118 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms