RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 STAG3L4Q8TBR4 150 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 C2orf15Q8WU43 125 aaKnown RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 NEUROG1Q92886 237 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 MS4A6EQ96DS6 147 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 YPEL4Q96NS1 127 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 AQP10Q96PS8 301 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 ZNF702PQ9H963 129 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 RARRES3Q9UL19 164 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 ZNF706Q9Y5V0 76 aaPredicted RBP2.26□□□□□ -2.05
VIM-210ENST00000637053 SLC25A15Q9Y619 301 aa2.26□□□□□ -2.05
VIM-210ENST00000637053 RGS12O14924 1447 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 MYH13Q9UKX3 1938 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 NRKQ7Z2Y5 1582 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 TRBV20-1A0A075B6N2 111 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 IGLV5-52A0A0A0MRZ9 124 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 IGKV1D-43A0A0B4J1Z2 117 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 TRBV27A0A0K0K1C4 114 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 TMEM272A0A1B0GTI8 110 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 ZNF860A6NHJ4 632 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 OOSP1A8MZH6 123 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 APOC4-APOC2K7ER74 178 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 SLC37A4O43826 429 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 COX7A2P2O60397 106 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BKO60814 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 NDUFB6O95139 128 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 UBL3O95164 117 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 SFT2D2O95562 160 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 CYB5AP00167 134 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 CFDP00746 253 aaPredicted RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 IGLV3-27P01718 113 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 APOC2P02655 101 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 SLC25A5P05141 298 aaKnown RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BJP06899 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 PRSS1P07477 247 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 PRSS2P07478 247 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 CXCL1P09341 107 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 ZNF705DP0CH99 300 aaPredicted RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 SCGB1C2P0DMR2 95 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 IGHV3-43DP0DP04 118 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HLA-DRB4P13762 266 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BOP23527 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BBP33778 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 CXCL5P42830 114 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 DAPP51397 102 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BDP58876 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 LINC00205P59089 165 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BCP62807 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 EBI3Q14213 229 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HMGN3Q15651 99 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST2H2BEQ16778 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 C17orf58Q2M2W7 97 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 FAM182AQ5T1J6 154 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 CXCL17Q6UXB2 119 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 PTAR1Q7Z6K3 402 aaPredicted RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 GTSCR1Q86UQ5 136 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 TEN1Q86WV5 123 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 PCP2Q8IVA1 136 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 ZNF584Q8IVC4 421 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 OR10P1Q8NGE3 313 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 OR5D16Q8NGK9 328 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 ATP6V0E2Q8NHE4 81 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 SCGB1C1Q8TD33 95 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 H1FXQ92522 213 aaKnown RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BHQ93079 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 RAB37Q96AX2 223 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BNQ99877 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HIST1H2BMQ99879 126 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 TP73-AS1Q9UF72 201 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 HLA-DRB4X5D2U9 266 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 ABCC3O15438 1527 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 N4BP2Q86UW6 1770 aaPredicted RBP2.25□□□□□ -2.05
VIM-210ENST00000637053 RIC1Q4ADV7 1423 aa2.25□□□□□ -2.05
VIM-210ENST00000637053 COL1A2P08123 1366 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 NUP210Q8TEM1 1887 aaPredicted RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 DOCK5Q9H7D0 1870 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 GLI3P10071 1580 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 CITO14578 2027 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 DOCK6Q96HP0 2047 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 SLIT3O75094 1523 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 TRIP11Q15643 1979 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 IGKV2D-30A0A075B6S6 120 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 TRAV9-2A0A087WT02 112 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 TRGV8A0A0C4DH27 118 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 IGHV3-38A0A0C4DH36 116 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 LOC107986453A0A1B0GWG9 222 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 LINC01548A6NM66 108 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 INAFM1C9JVW0 142 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 NDUFC2-KCTD14E9PQ53 114 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 F8W1H4 67 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 M0R2P5 195 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 NDUFB3O43676 98 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 SYNGR2O43760 224 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 ZNF253O75346 499 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 TRACP01848 142 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 HLA-DPB1P04440 258 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 SLC25A6P12236 298 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 IL3RAP26951 378 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 HINT1P49773 126 aaPredicted RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 RPL23P62829 140 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms