RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 LINC00479Q96M42 142 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 GSX1Q9H4S2 264 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 SOX21Q9Y651 276 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 WDFY3Q8IZQ1 3526 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 IGHV3OR15-7A0A075B7D8 119 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 A0A1B0GXF2 115 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 GUSBP1Q15486 140 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 VAMP3Q15836 100 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 VWA1Q6PCB0 445 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 Q6ZVH6 145 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 CNEP1R1Q8N9A8 125 aa12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 COL27A1Q8IZC6 1860 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-220ENST00000635988 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 A0A1W2PN81 502 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 OR4C46A6NHA9 309 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 CA7P43166 264 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 CAMPP49913 170 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 ERHP84090 104 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 HBBP68871 147 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 RHOGP84095 191 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 C10orf113Q5VZT2 155 aa12.04□□□□□ -0.48
CACNA1A-220ENST00000635988 GPR6P46095 362 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 UBALD2Q8IYN6 164 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 INS-IGF2F8WCM5 200 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 MLANAQ16655 118 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 MORN5Q5VZ52 161 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 PRR27Q6MZM9 219 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 C12orf54Q6X4T0 127 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 STXBP6Q8NFX7 210 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 SSBP4Q9BWG4 385 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 TMEM191AQ9H0A3 160 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 C7orf69Q9H7B7 122 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
CACNA1A-220ENST00000635988 HSBP1L1C9JCN9 74 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 SYS1-DBNDD2H3BUS1 97 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 LHBP01229 141 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 OR5AL1P0C617 328 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 CT83Q5H943 113 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 UTF1Q5T230 341 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 OR2T6Q8NHC8 308 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 LOXL4Q96JB6 756 aa12.02□□□□□ -0.48
CACNA1A-220ENST00000635988 IGHV1-18A0A0C4DH31 117 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 A8MWL6 223 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 PPBPP02775 128 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 CT45A6P0DMU7 189 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 CT45A5P0DMU8 189 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 CT45A7P0DMV0 189 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 SLC25A34Q6PIV7 304 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 MOGAT3Q86VF5 341 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 FAM169BQ8N8A8 192 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 OSR1Q8TAX0 266 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 PRUNE2Q8WUY3 3088 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 ZNF430Q9H8G1 570 aaPredicted RBP12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 CLEC5AQ9NY25 188 aa12.02□□□□□ -0.49
CACNA1A-220ENST00000635988 LEPROTL1O95214 131 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 PYYP10082 97 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 CEACAM8P31997 349 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 KIR2DL2P43627 348 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 LINC00574Q9H8X3 128 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 SRRM4A7MD48 611 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 LAMTOR5O43504 91 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 IGHG3P01860 377 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 IGKV1-16P04430 117 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 SAA1P0DJI8 122 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 MPV17L2Q567V2 206 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 FAM120AOSQ5T036 256 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 SSX8Q7RTT4 187 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 FXYD5Q96DB9 178 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 URB1-AS1Q96HZ7 61 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 GPR82Q96P67 336 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 RPP21Q9H633 154 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 NDUFA4L2Q9NRX3 87 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 EPDR1Q9UM22 224 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 KLF12Q9Y4X4 402 aa12.01□□□□□ -0.49
CACNA1A-220ENST00000635988 TCRBV4S1A1TA0A5B7 111 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 TOX4O94842 621 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 MYCNOSP40205 109 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 PDPNQ86YL7 162 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 KIR3DL3Q8N743 410 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 WASHC3Q9Y3C0 194 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 TM4SF5O14894 197 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 LIPFP07098 398 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 ZNF883P0CG24 379 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 SUB1P53999 127 aaKnown RBP eCLIP12□□□□□ -0.49
CACNA1A-220ENST00000635988 DEFB125Q8N687 156 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 OR10W1Q8NGF6 305 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 FAM222BQ8WU58 562 aa12□□□□□ -0.49
CACNA1A-220ENST00000635988 IGHV1-24A0A0C4DH33 117 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 TAX1BP3O14907 124 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 HLA-DRB1P01911 266 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 APOA2P02652 100 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 BVES-AS1Q5T3Y7 98 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
CACNA1A-220ENST00000635988 RPUSD1Q9UJJ7 312 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms