RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 GABRA2P47869 451 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 RHOBP62745 196 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 RELQ04864 619 aaPredicted RBP12.56□□□□□ -0.4
CLN8-209ENST00000635970 AESQ08117 197 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 ACP7Q6ZNF0 438 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 Q6ZWC4 215 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 CORO2AQ92828 525 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 SDSLQ96GA7 329 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 COQ2Q96H96 371 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 VAMP8Q9BV40 100 aa12.56□□□□□ -0.4
CLN8-209ENST00000635970 ABCA1O95477 2261 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 TLN2Q9Y4G6 2542 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 MMP23AO75900 390 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 TFF1P04155 84 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 OR10J4P0C629 311 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 DUTP33316 252 aaKnown RBP12.55□□□□□ -0.4
CLN8-209ENST00000635970 VDAC2P45880 294 aaPredicted RBP12.55□□□□□ -0.4
CLN8-209ENST00000635970 LGALS4P56470 323 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 ERVK-16P61578 105 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 RPEL1Q2QD12 228 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 FAM90A1Q86YD7 464 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 MGST2Q99735 147 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
CLN8-209ENST00000635970 GOLT1BQ9Y3E0 138 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 LSM4Q9Y4Z0 139 aaKnown RBP12.55□□□□□ -0.4
CLN8-209ENST00000635970 MALRD1Q5VYJ5 2156 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 ARHGAP32A7KAX9 2087 aa12.55□□□□□ -0.4
CLN8-209ENST00000635970 SCO2A0A1W2PP80 73 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 OR9G9P0C7N8 305 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 G0S2P27469 103 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 GCHFRP30047 84 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 TMEM155Q4W5P6 130 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 GCSAMLQ5JQS6 135 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 PRAMEF5Q5TYX0 476 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 LYPD2Q6UXB3 125 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 Q71RC1 249 aaPredicted RBP12.54□□□□□ -0.4
CLN8-209ENST00000635970 OR4B1Q8NGF8 309 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 MRGPRDQ8TDS7 321 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 LPAR2Q9HBW0 351 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 HEYLQ9NQ87 328 aaPredicted RBP12.54□□□□□ -0.4
CLN8-209ENST00000635970 AURKAIP1Q9NWT8 199 aaPredicted RBP12.54□□□□□ -0.4
CLN8-209ENST00000635970 TP53TG3Q9ULZ0 132 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.54□□□□□ -0.44e-15■■■■□ 21.5
CLN8-209ENST00000635970 CSPG4Q6UVK1 2322 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 SAA2-SAA4A0A096LPE2 208 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 CFHR2P36980 270 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 RPL31P62899 125 aaKnown RBP12.54□□□□□ -0.4
CLN8-209ENST00000635970 OR10J3Q5JRS4 329 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 TMEM208Q9BTX3 173 aa12.54□□□□□ -0.4
CLN8-209ENST00000635970 FCN1O00602 326 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 SERF1AO75920 110 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 LY6G6DO95868 133 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 REG1AP05451 166 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 DEFA4P12838 97 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 GPR12P47775 334 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 SMIM21Q3B7S5 101 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 TEX36Q5VZQ5 186 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 TEPPQ6URK8 271 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 OR1L6Q8NGR2 347 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 EAF1Q96JC9 268 aaPredicted RBP12.53□□□□□ -0.4
CLN8-209ENST00000635970 RBM14Q96PK6 669 aaKnown RBP12.53□□□□□ -0.4
CLN8-209ENST00000635970 HSPB9Q9BQS6 159 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 SAMD10Q9BYL1 202 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 SLC25A10Q9UBX3 287 aaPredicted RBP12.53□□□□□ -0.4
CLN8-209ENST00000635970 JPT1Q9UK76 154 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 PSG11Q9UQ72 335 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 DOCK11Q5JSL3 2073 aa12.53□□□□□ -0.4
CLN8-209ENST00000635970 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 BRS3P32247 399 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 RPS16P62249 146 aaKnown RBP12.52□□□□□ -0.4
CLN8-209ENST00000635970 DUX4L9Q6RFH8 374 aaPredicted RBP12.52□□□□□ -0.4
CLN8-209ENST00000635970 SIGLECL1Q8N7X8 197 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 RNF2Q99496 336 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 ZNF586Q9NXT0 402 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 CTSZQ9UBR2 303 aa12.52□□□□□ -0.4
CLN8-209ENST00000635970 C15orf65H3BRN8 121 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 FSTL3O95633 263 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 CBLN1P23435 193 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.41
CLN8-209ENST00000635970 RTL8BQ17RB0 113 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 SPINK9Q5DT21 86 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 TMEM167BQ9NRX6 74 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 CBY1Q9Y3M2 126 aa12.52□□□□□ -0.41
CLN8-209ENST00000635970 A0A1B0GUS0 222 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 FCGR3BO75015 233 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 IL6RP08887 468 aaPredicted RBP12.51□□□□□ -0.41
CLN8-209ENST00000635970 OR5G3P0C626 314 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 LINC00310P59036 64 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 CR1LQ2VPA4 569 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 STUMQ69YW2 141 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 MMD2Q8IY49 270 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 OR13A1Q8NGR1 328 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 YTHDF2Q9Y5A9 579 aaKnown RBP12.51□□□□□ -0.41
CLN8-209ENST00000635970 ZFHX3Q15911 3703 aa12.51□□□□□ -0.41
CLN8-209ENST00000635970 SNURFLB1AK76 121 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms