RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 C20orf144Q9BQM9 153 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 C11orf68Q9H3H3 251 aaKnown RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 TDRD6O60522 2096 aaKnown RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 A0A0G2JMM0 328 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 A0A1W2PPB8 328 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 KIR3DP1A8MWS1 328 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 ITGB1BP1O14713 200 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 CD33P20138 364 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 RNASEH2CQ8TDP1 164 aaKnown RBP9.76□□□□□ -0.85
COL11A1-211ENST00000635193 PILRBQ9UKJ0 227 aa9.76□□□□□ -0.85
COL11A1-211ENST00000635193 CCL21O00585 134 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 FAM159AQ6UWV7 190 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 NXT2Q9NPJ8 142 aaKnown RBP9.75□□□□□ -0.85
COL11A1-211ENST00000635193 SCN10AQ9Y5Y9 1956 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 IGHV3-35A0A0C4DH35 117 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 SPINK8P0C7L1 97 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 NPPCP23582 126 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 PSG7Q13046 419 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 GUSBP1Q15486 140 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 AGMATQ9BSE5 352 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 GP6Q9HCN6 339 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 GBF1Q92538 1859 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 ZNF815PA8K554 130 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 TM4SF5O14894 197 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 PRTN3P24158 256 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 ASIPP42127 132 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 DOCK4Q8N1I0 1966 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 ZNF497Q6ZNH5 498 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 SIGLEC12Q96PQ1 595 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 OTORQ9NRC9 128 aa9.75□□□□□ -0.85
COL11A1-211ENST00000635193 CECR9P0C854 216 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 KIR3DL3Q8N743 410 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 EPDR1Q9UM22 224 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
COL11A1-211ENST00000635193 ATP5G2Q06055 141 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 DDB2Q92466 427 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 WDR83OSQ9Y284 106 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 PSMB11A5LHX3 300 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
COL11A1-211ENST00000635193 EFNB3Q15768 340 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 C15orf61A6NNL5 157 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 GLRXP35754 106 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 FAM201AQ5SY85 155 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 FAM166AQ6J272 317 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
COL11A1-211ENST00000635193 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
COL11A1-211ENST00000635193 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 PPBPP02775 128 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 TMEM249Q2WGJ8 235 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
COL11A1-211ENST00000635193 CNOT1A5YKK6 2376 aaKnown RBP9.73□□□□□ -0.85
COL11A1-211ENST00000635193 TNS1Q9HBL0 1735 aaKnown RBP9.73□□□□□ -0.85
COL11A1-211ENST00000635193 FAM186AA6NE01 2351 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 IQCF6A8MYZ5 107 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 H3BRM9 83 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 NPFFO15130 113 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 UCNP55089 124 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 ATP1A1-AS1Q5TC04 95 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 RASL11AQ6T310 242 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 FAM216BQ8N7L0 139 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 EEF1AKMT3Q96AZ1 226 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 JMJD8Q96S16 334 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 FBXL15Q9H469 300 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 SMPXQ9UHP9 88 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 LCTP09848 1927 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 TRBV7-9A0A0J9YWB2 115 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 UPK2O00526 184 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 GAGE1Q13065 139 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 TMEM155Q4W5P6 130 aa9.73□□□□□ -0.85
COL11A1-211ENST00000635193 IGHV3OR16-13A0A075B7E8 117 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 IGHV3-74A0A0B4J1X5 117 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 IGKV1-12A0A0C4DH73 117 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 C9JCJ5 164 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 H7C1H1 209 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 IGKV1D-12P01611 117 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 SRSF6Q13247 344 aaKnown RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 ADAMTSL5Q6ZMM2 481 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 DMRTC2Q8IXT2 367 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 CITED1Q99966 193 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 S4R3C0 116 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 PLXNA1Q9UIW2 1896 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 AHCTF1Q8WYP5 2266 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 SAA2-SAA4A0A096LPE2 208 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 TRAV2A0A0B4J234 112 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 YPEL1O60688 119 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 SAA1P0DJI8 122 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 SAA2P0DJI9 122 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 YPEL2Q96QA6 119 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 FAM90A1Q86YD7 464 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 DLX4Q92988 240 aaPredicted RBP9.72□□□□□ -0.85
COL11A1-211ENST00000635193 RFNGQ9Y644 331 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 LOC105371242A0A075B767 164 aa9.72□□□□□ -0.85
COL11A1-211ENST00000635193 SYS1-DBNDD2H3BUS1 97 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms