RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 COMMD3Q9UBI1 195 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 CTSZQ9UBR2 303 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 HES2Q9Y543 173 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 ENPP4Q9Y6X5 453 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 WDFY3Q8IZQ1 3526 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 CITO14578 2027 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 FNDC10F2Z333 226 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 J3QRK9 145 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 PMP2P02689 132 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 IL7P13232 177 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 PI3P19957 117 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 IMPA1P29218 277 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 OR10J1P30954 320 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 POLR2IP36954 125 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 RBMXP38159 391 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 GUCA1AP43080 201 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 INSL3P51460 131 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 LINC00313P59037 77 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 FKBP3Q00688 224 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 LINC00303Q3SY05 128 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 LINC00299Q6ZSB3 139 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 PTAR1Q7Z6K3 402 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 GEMIN6Q8WXD5 167 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 KCNS1Q96KK3 526 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 PEBP4Q96S96 227 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 IMUPQ9GZP8 106 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 CBLN4Q9NTU7 201 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 TAS2R8Q9NYW2 309 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 PTPRFP10586 1907 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 MYO18BQ8IUG5 2567 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 HECTD1Q9ULT8 2610 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 IGLV5-37A0A075B6J1 123 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 FAM236AA0A1B0GUQ0 79 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 FAM236BA0A1B0GV22 79 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 A8MUN3 132 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 GSTZ1O43708 216 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF432O94892 652 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 CD14P08571 375 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 GZMBP10144 247 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 PSMB8P28062 276 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 SRPXP78539 464 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 REG3AQ06141 175 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 Q0VFX4 171 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 CATR1Q13166 79 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 KIAA0087Q14695 138 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 ELOCQ15369 112 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 RBMY1FQ15415 496 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF440Q8IYI8 595 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 OR2M3Q8NG83 312 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 MRPL32Q9BYC8 188 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 MRPL20Q9BYC9 149 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 TMEM191AQ9H0A3 160 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 MED28Q9H204 178 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 RPRMQ9NS64 109 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 OCIAD1Q9NX40 245 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 TAAR3PQ9P1P4 343 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 RPL26L1Q9UNX3 145 aaKnown RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF443Q9Y2A4 671 aaPredicted RBP3.69□□□□□ -1.82
SDCBP-213ENST00000630925 OTOGLQ3ZCN5 2332 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 A0A1B0GUL6 1792 aa3.69□□□□□ -1.82
SDCBP-213ENST00000630925 IGSF10Q6WRI0 2623 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 IGHV1-69-2A0A0G2JMI3 117 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 LST1O00453 97 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 LYZL6O75951 148 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 TRGC2P03986 189 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 HKR1P10072 659 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 DIO3P55073 304 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 FOXA3P55318 350 aaPredicted RBP3.68□□□□□ -1.82
SDCBP-213ENST00000630925 TPPP2P59282 170 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 HES3Q5TGS1 186 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 NXNL2Q5VZ03 156 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF773Q6PK81 442 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 PCSK4Q6UW60 755 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 LCN15Q6UWW0 184 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 Q6ZS49 121 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 SAXO1Q8IYX7 474 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 TTC9CQ8N5M4 171 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 SUMF2Q8NBJ7 301 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 RPS4Y2Q8TD47 263 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 SAR1AQ9NR31 198 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 INSL5Q9Y5Q6 135 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 FLVCR1Q9Y5Y0 555 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 SLC25A15Q9Y619 301 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 RALGAPA2Q2PPJ7 1873 aa3.68□□□□□ -1.82
SDCBP-213ENST00000630925 TRGV8A0A0C4DH27 118 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 ARRDC5A6NEK1 342 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 IFITM10A6NMD0 228 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 BBIP1A8MTZ0 92 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 IGHV3-43DP0DP04 118 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 CDKN2AP42771 156 aaKnown RBP3.67□□□□□ -1.82
SDCBP-213ENST00000630925 SLURP1P55000 103 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 MYL5Q02045 173 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 SPANXN3Q5MJ09 141 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 DRAM1Q8N682 238 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 NKAPP1Q8N9T2 125 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 ST6GAL2Q96JF0 529 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TMEM243Q9BU79 118 aa3.67□□□□□ -1.82
SDCBP-213ENST00000630925 POLR2J3Q9H1A7 115 aaKnown RBP3.67□□□□□ -1.82
SDCBP-213ENST00000630925 TCEAL2Q9H3H9 227 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms