RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 FAM131CQ96AQ9 280 aa9.18□□□□□ -0.94
VPS8-227ENST00000625842 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
VPS8-227ENST00000625842 CD81P60033 236 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 FGF16O43320 207 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 DAZAP2Q15038 168 aaPredicted RBP9.17□□□□□ -0.94
VPS8-227ENST00000625842 ACTL10Q5JWF8 245 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 TCF23Q7RTU1 214 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 MRPL13Q9BYD1 178 aaKnown RBP9.17□□□□□ -0.94
VPS8-227ENST00000625842 S4R3C0 116 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 BUB1B-PAK6H3BSN5 160 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 RHODO00212 210 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 COL8A2P25067 703 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 TCTAP57738 103 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 MEF2BQ02080 365 aaPredicted RBP9.17□□□□□ -0.94
VPS8-227ENST00000625842 SS18Q15532 418 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 GGNQ86UU5 652 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 AMELYQ99218 206 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 PSMG3Q9BT73 122 aaPredicted RBP9.17□□□□□ -0.94
VPS8-227ENST00000625842 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
VPS8-227ENST00000625842 LINC00527Q9UJ94 153 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 LRRC75A-AS1Q8N1F1 130 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 VPREB3Q9UKI3 123 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 ATAD5Q96QE3 1844 aa9.17□□□□□ -0.94
VPS8-227ENST00000625842 PRR32B1ATL7 298 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 CCL18P55774 89 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 TMEM249Q2WGJ8 235 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 MRAPQ8TCY5 172 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 RCC1LQ96I51 464 aaKnown RBP9.16□□□□□ -0.94
VPS8-227ENST00000625842 SLX1AQ9BQ83 275 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 TRAF4Q9BUZ4 470 aaPredicted RBP9.16□□□□□ -0.94
VPS8-227ENST00000625842 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
VPS8-227ENST00000625842 CFHR2P36980 270 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 ZNF329Q86UD4 541 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 RFNGQ9Y644 331 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 ZNF236Q9UL36 1845 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 CD24P25063 80 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 CD200R1LQ6Q8B3 271 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 KIAA1217Q5T5P2 1943 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 A0A1W2PP11 408 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
VPS8-227ENST00000625842 DEFB130BP0DP73 79 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 DEFB130AP0DP74 79 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 SYNJ2BPP57105 145 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 PDZD11Q5EBL8 140 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 KLF17Q5JT82 389 aaPredicted RBP9.15□□□□□ -0.94
VPS8-227ENST00000625842 S100A7L2Q5SY68 101 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 OR5A1Q8NGJ0 315 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 PGLYRP4Q96LB8 373 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 JPT2Q9H910 190 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 GCHFRP30047 84 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 MORN3Q6PF18 240 aaPredicted RBP9.15□□□□□ -0.94
VPS8-227ENST00000625842 C1QL2Q7Z5L3 287 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 ACACBO00763 2458 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 F2Z2F3 143 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 NDUFB4O95168 129 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 TDGF1P3P51864 188 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 LINC01590Q5TEZ4 76 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 ZNF497Q6ZNH5 498 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 SLC25A48Q6ZT89 311 aaKnown RBP9.15□□□□□ -0.94
VPS8-227ENST00000625842 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 RHPN1-AS1Q9BWJ2 59 aa9.15□□□□□ -0.94
VPS8-227ENST00000625842 ZNF561-AS1K7EIQ3 104 aa9.15□□□□□ -0.95
VPS8-227ENST00000625842 SRSF6Q13247 344 aaKnown RBP9.15□□□□□ -0.95
VPS8-227ENST00000625842 ZNF345Q14585 488 aa9.15□□□□□ -0.95
VPS8-227ENST00000625842 INSL4Q14641 139 aa9.15□□□□□ -0.95
VPS8-227ENST00000625842 ZNF680Q8NEM1 530 aa9.15□□□□□ -0.95
VPS8-227ENST00000625842 TRBV9A0A0B4J1U6 114 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 H3BUA1 57 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 FHITP49789 147 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 KLRD1Q13241 179 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 DMRTA1Q5VZB9 504 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 LURAP1LQ8IV03 231 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 MAPK1IP1LQ8NDC0 245 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 OR4D5Q8NGN0 318 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 PPBPP02775 128 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 PRB1P04280 392 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SHISA2Q6UWI4 295 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SIGLEC9Q9Y336 463 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 TRBV6-7A0A0A0MS04 114 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 A0A1B0GWJ7 208 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SNRPCP09234 159 aaKnown RBP9.14□□□□□ -0.95
VPS8-227ENST00000625842 ARL14EPLP0DKL9 152 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 AANATQ16613 207 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SH2D6Q7Z4S9 175 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 CACNA1IQ9P0X4 2223 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SNRNP200O75643 2136 aaKnown RBP9.14□□□□□ -0.95
VPS8-227ENST00000625842 TGFBR3LH3BV60 316 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SOD3P08294 240 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 FAM3BP58499 235 aaPredicted RBP9.14□□□□□ -0.95
VPS8-227ENST00000625842 FOXB2Q5VYV0 432 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 TMEM91Q6ZNR0 172 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 C1orf122Q6ZSJ8 110 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
VPS8-227ENST00000625842 A0A1B0GUT8 65 aa9.13□□□□□ -0.95
VPS8-227ENST00000625842 NAT1P18440 290 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms