RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 CSMD1Q96PZ7 3565 aa1.15□□□□□ -2.23
CDKL5-207ENST00000624700 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
CDKL5-207ENST00000624700 EP300Q09472 2414 aaPredicted RBP1.15□□□□□ -2.23
CDKL5-207ENST00000624700 PCNX1Q96RV3 2341 aa1.15□□□□□ -2.23
CDKL5-207ENST00000624700 USP9YO00507 2555 aaPredicted RBP1.14□□□□□ -2.23
CDKL5-207ENST00000624700 CNOT1A5YKK6 2376 aaKnown RBP1.14□□□□□ -2.23
CDKL5-207ENST00000624700 RP1P56715 2156 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 CEP295Q9C0D2 2601 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 EEF1E1-BLOC1S5C9J1V9 151 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 IFNA10P01566 189 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 UBBP0CG47 229 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 SULT1A1P50225 295 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 NKX2-5P52952 324 aaPredicted RBP1.14□□□□□ -2.23
CDKL5-207ENST00000624700 DEFB115Q30KQ5 88 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 HIST2H3PS2Q5TEC6 136 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 AADACL3Q5VUY0 350 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 TMEM106AQ96A25 262 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 DERL1Q9BUN8 251 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 MICAL3Q7RTP6 2002 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 ECM29Q5VYK3 1845 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 POLEQ07864 2286 aa1.14□□□□□ -2.23
CDKL5-207ENST00000624700 TENM2Q9NT68 2774 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 HCRTO43612 131 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 OR5F1O95221 314 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 IFNA5P01569 189 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 HIST1H1EP10412 219 aaKnown RBP1.13□□□□□ -2.23
CDKL5-207ENST00000624700 SPCS3P61009 180 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 SUPT4H1P63272 117 aaKnown RBP1.13□□□□□ -2.23
CDKL5-207ENST00000624700 OR2F1Q13607 317 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 SURF2Q15527 256 aaPredicted RBP1.13□□□□□ -2.23
CDKL5-207ENST00000624700 SPANXN5Q5MJ07 72 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 ZNF826PQ6ZT77 177 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 WFDC11Q8NEX6 87 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 OR4C6Q8NH72 309 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 TRABDQ9H4I3 376 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 DIDO1Q9BTC0 2240 aaKnown RBP1.13□□□□□ -2.23
CDKL5-207ENST00000624700 ACACBO00763 2458 aa1.13□□□□□ -2.23
CDKL5-207ENST00000624700 ROS1P08922 2347 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 EXPH5Q8NEV8 1989 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 NUP155O75694 1391 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 BSNQ9UPA5 3926 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 NBEAQ8NFP9 2946 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 TRAV14DV4A0A0A6YYC5 116 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 TNNC2P02585 160 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 CLPSP04118 112 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 HTR1AP08908 422 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 KRTAP10-4P60372 401 aaPredicted RBP1.12□□□□□ -2.23
CDKL5-207ENST00000624700 RUNX1Q01196 453 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 PTRHD1Q6GMV3 140 aaKnown RBP1.12□□□□□ -2.23
CDKL5-207ENST00000624700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.12□□□□□ -2.23
CDKL5-207ENST00000624700 OTUD6BQ8N6M0 293 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 ZNF439Q8NDP4 499 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 OR51D1Q8NGF3 324 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 OR5B17Q8NGF7 314 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 MRPL57Q9BQC6 102 aaKnown RBP1.12□□□□□ -2.23
CDKL5-207ENST00000624700 MIXL1Q9H2W2 232 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 CISHQ9NSE2 258 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 COL4A5P29400 1685 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 TTC21AQ8NDW8 1320 aa1.12□□□□□ -2.23
CDKL5-207ENST00000624700 DENND4CQ5VZ89 1909 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
CDKL5-207ENST00000624700 TNRC6BQ9UPQ9 1833 aaKnown RBP1.11□□□□□ -2.23
CDKL5-207ENST00000624700 GOLGA6L19H0YKK7 550 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 HLA-DRB1P01911 266 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 COX6A1P12074 109 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 SNRPD2P62316 118 aaKnown RBP1.11□□□□□ -2.23
CDKL5-207ENST00000624700 HBA1P69905 142 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 KRTAP20-1Q3LI63 56 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 TEX36Q5VZQ5 186 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 ZNF565Q8N9K5 539 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 PFN4Q8NHR9 129 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 ARL5BQ96KC2 179 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 GINS4Q9BRT9 223 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 REG4Q9BYZ8 158 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 NOSIPQ9Y314 301 aaKnown RBP1.11□□□□□ -2.23
CDKL5-207ENST00000624700 ITPR1Q14643 2758 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 CELSR2Q9HCU4 2923 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 CFAP54Q96N23 3096 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 IQSEC2Q5JU85 1478 aa1.11□□□□□ -2.23
CDKL5-207ENST00000624700 CEP290O15078 2479 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.1□□□□□ -2.23
CDKL5-207ENST00000624700 A0A0D9SG52 128 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 GEMIN2O14893 280 aaKnown RBP1.1□□□□□ -2.23
CDKL5-207ENST00000624700 IGKV1-5P01602 117 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 IFNA16P05015 189 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 HIST1H1TP22492 207 aaPredicted RBP1.1□□□□□ -2.23
CDKL5-207ENST00000624700 IMPG1Q17R60 797 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 ALKAL1Q6UXT8 129 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 MIR17HGQ75NE6 70 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 PHF13Q86YI8 300 aaPredicted RBP1.1□□□□□ -2.23
CDKL5-207ENST00000624700 TMEM86BQ8N661 226 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 FBXL12Q9NXK8 326 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 TMEM56-RWDD3S4R434 201 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 BCL9LQ86UU0 1499 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 MXRA5Q9NR99 2828 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 TECTAO75443 2155 aa1.1□□□□□ -2.23
CDKL5-207ENST00000624700 GOLGB1Q14789 3259 aaKnown RBP1.09□□□□□ -2.23
CDKL5-207ENST00000624700 AKAP13Q12802 2813 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 NCOA1Q15788 1441 aa1.09□□□□□ -2.23
CDKL5-207ENST00000624700 NSD1Q96L73 2696 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms