RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SAA2P0DJI9 122 aaPredicted RBP11.49□□□□□ -0.57
LDB3-209ENST00000623056 MEOX1P50221 254 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 LINC00173Q6ZV60 143 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 SMIM15Q7Z3B0 74 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 DEFB125Q8N687 156 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
LDB3-209ENST00000623056 C1RLQ9NZP8 487 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 TNCP24821 2201 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 MUC21A0A0G2JKD1 596 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 MUC21A0A140T8X8 626 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 SYS1-DBNDD2H3BUS1 97 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 SP9P0CG40 484 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 DUSP3P51452 185 aaPredicted RBP11.49□□□□□ -0.57
LDB3-209ENST00000623056 PRCDQ00LT1 54 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 CR1LQ2VPA4 569 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 CT45A1Q5HYN5 189 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 MUC21Q5SSG8 566 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 CT45A3Q8NHU0 189 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
LDB3-209ENST00000623056 IGHV1-24A0A0C4DH33 117 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 PEX7O00628 323 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 MGST3O14880 152 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 AGFG2O95081 481 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 FABP6P51161 128 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 SLC25A34Q6PIV7 304 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 ZNF329Q86UD4 541 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 DEFB127Q9H1M4 99 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 CALYQ9NYX4 217 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 ABI3Q9P2A4 366 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 PYYP10082 97 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 INO80CQ6PI98 192 aaPredicted RBP11.48□□□□□ -0.57
LDB3-209ENST00000623056 C7orf69Q9H7B7 122 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 AHCTF1Q8WYP5 2266 aa11.48□□□□□ -0.57
LDB3-209ENST00000623056 PRR14LQ5THK1 2151 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 IGHV3OR15-7A0A075B7D8 119 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 HIST1H1EP10412 219 aaKnown RBP11.47□□□□□ -0.57
LDB3-209ENST00000623056 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
LDB3-209ENST00000623056 SSX8Q7RTT4 187 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 ZNRF1Q8ND25 227 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 CHRDL1Q9BU40 450 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 ZNF257Q9Y2Q1 563 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 POU2AF1Q16633 256 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 C2orf83Q53S99 150 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 FAM162BQ5T6X4 162 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 ZNF841Q6ZN19 808 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 SPRR3Q9UBC9 169 aa11.47□□□□□ -0.57
LDB3-209ENST00000623056 URB1O60287 2271 aaKnown RBP11.46□□□□□ -0.57
LDB3-209ENST00000623056 UPK2O00526 184 aa11.46□□□□□ -0.57
LDB3-209ENST00000623056 TOX4O94842 621 aa11.46□□□□□ -0.57
LDB3-209ENST00000623056 RNASE2P10153 161 aaKnown RBP11.46□□□□□ -0.57
LDB3-209ENST00000623056 CD24P25063 80 aa11.46□□□□□ -0.57
LDB3-209ENST00000623056 REG1BP48304 166 aa11.46□□□□□ -0.57
LDB3-209ENST00000623056 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
LDB3-209ENST00000623056 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.46□□□□□ -0.57
LDB3-209ENST00000623056 PPP1R35Q8TAP8 253 aa11.46□□□□□ -0.57
LDB3-209ENST00000623056 TEX50A0A1B0GTY4 177 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 LEPROTL1O95214 131 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 HBBP68871 147 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 CD69Q07108 199 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 TCF24Q7RTU0 167 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 CHCHD1Q96BP2 118 aaKnown RBP11.46□□□□□ -0.58
LDB3-209ENST00000623056 PAXXQ9BUH6 204 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 TMEM191AQ9H0A3 160 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 SCRT2Q9NQ03 307 aa11.46□□□□□ -0.58
LDB3-209ENST00000623056 SRRM5B3KS81 715 aa11.45□□□□□ -0.58
LDB3-209ENST00000623056 HSBP1L1C9JCN9 74 aa11.45□□□□□ -0.58
LDB3-209ENST00000623056 PSG9Q00887 426 aa11.45□□□□□ -0.58
LDB3-209ENST00000623056 C17orf58Q2M2W7 97 aa11.45□□□□□ -0.58
LDB3-209ENST00000623056 VWA1Q6PCB0 445 aa11.45□□□□□ -0.58
LDB3-209ENST00000623056 ZNF714Q96N38 554 aa11.45□□□□□ -0.58
LDB3-209ENST00000623056 IGKV3-15P01624 115 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 GNG5P63218 68 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 OR1L8Q8NGR8 309 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 KLF13Q9Y2Y9 288 aaPredicted RBP11.44□□□□□ -0.58
LDB3-209ENST00000623056 MED13Q9UHV7 2174 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
LDB3-209ENST00000623056 CD5LO43866 347 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 COX7A2P2O60397 106 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 CGB3P0DN86 165 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 CGB7P0DN87 165 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
LDB3-209ENST00000623056 OR2Z1Q8NG97 314 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 OR10W1Q8NGF6 305 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 ZNF835Q9Y2P0 537 aa11.44□□□□□ -0.58
LDB3-209ENST00000623056 TRGV5A0A0B4J1U4 118 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 KLRC4-KLRK1H3BQV0 150 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 HLA-DRB1P01911 266 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 ATP5IP56385 69 aaPredicted RBP11.43□□□□□ -0.58
LDB3-209ENST00000623056 SGK494Q96LW2 274 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 A0A087X0K7 114 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 GAGE12BA1L429 117 aa11.43□□□□□ -0.58
LDB3-209ENST00000623056 CECR9P0C854 216 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms