RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

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Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 GINS3Q9BRX5 216 aa13.95□□□□□ -0.18
PTCHD3-202ENST00000622555 NUDT19A8MXV4 375 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 TSPAN9O75954 239 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 HIST1H1BP16401 226 aaKnown RBP13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 PPIFP30405 207 aaKnown RBP13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 DLK1P80370 383 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 CD69Q07108 199 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 MLANAQ16655 118 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 ATP6V1FQ16864 119 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 MS4A10Q96PG2 267 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 TMEM147Q9BVK8 224 aa13.94□□□□□ -0.18
PTCHD3-202ENST00000622555 IGHV3-21A0A0B4J1V1 117 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 SMCO3A2RU48 225 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 TEX46H3BTG2 121 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 OR2J3O76001 311 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 DFFBO76075 338 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 MT-CO2P00403 227 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 SRSF2Q01130 221 aaKnown RBP13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 CFHR3Q02985 330 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 UQCC3Q6UW78 93 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 SLC16A13Q7RTY0 426 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 ZNF329Q86UD4 541 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 GGACTQ9BVM4 153 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 FNDC4Q9H6D8 234 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 SERTAD4Q9NUC0 356 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 UQCC1Q9NVA1 299 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 THYN1Q9P016 225 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 CUBNO60494 3623 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 NF1P21359 2839 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 BORCS7-ASMTA0A0B4J1R7 106 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 IGHV3-48P01763 117 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 SEC11BP0C7V7 166 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 GPX4P36969 197 aaPredicted RBP13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 DEFA5Q01523 94 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 ETFRF1Q6IPR1 90 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 FBXL7Q9UJT9 491 aa13.93□□□□□ -0.18
PTCHD3-202ENST00000622555 UBE2L5PA0A1B0GUS4 154 aa13.92□□□□□ -0.18
PTCHD3-202ENST00000622555 SLC35B1P78383 322 aa13.92□□□□□ -0.18
PTCHD3-202ENST00000622555 RHOGP84095 191 aa13.92□□□□□ -0.18
PTCHD3-202ENST00000622555 ZNF266Q14584 549 aa13.92□□□□□ -0.18
PTCHD3-202ENST00000622555 SLC35E1Q96K37 410 aa13.92□□□□□ -0.18
PTCHD3-202ENST00000622555 TRBV9A0A0B4J1U6 114 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 PSMB11A5LHX3 300 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 H3BUA1 57 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 I3L2K1 104 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 K7EIM0 57 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 NDUFB8O95169 186 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 IFNA5P01569 189 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 TRGV3P03979 118 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 SPP1P10451 314 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 PF4V1P10720 104 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 VWC2Q2TAL6 325 aa13.91□□□□□ -0.18
PTCHD3-202ENST00000622555 ZNF705EA8MWA4 302 aaPredicted RBP13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 IGLV1-40P01703 118 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 IGHG4P01861 327 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 TPPP2P59282 170 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 GAMTQ14353 236 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 KLK9Q2XQG4 91 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 C10orf99Q6UWK7 81 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 NECAP1Q8NC96 275 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 LYPD6BQ8NI32 183 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 ACY3Q96HD9 319 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 C16orf95Q9H693 158 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 KLK9Q9UKQ9 250 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 FNDC10F2Z333 226 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 NDUFA7O95182 113 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 BLOC1S1P78537 153 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 BTNL8Q6UX41 500 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 IL34Q6ZMJ4 242 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 S4R3C0 116 aa13.9□□□□□ -0.18
PTCHD3-202ENST00000622555 BRI3O95415 125 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 RND2P52198 227 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 C15orf32Q32M92 178 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 ACSM6Q6P461 480 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 SCGB1C1Q8TD33 95 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 KLK15Q9H2R5 256 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 NPVFQ9HCQ7 196 aa13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 MRPL36Q9P0J6 103 aaKnown RBP13.89□□□□□ -0.19
PTCHD3-202ENST00000622555 C2CD3Q4AC94 2353 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 FAM223BA6NKX1 122 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 PXDC1Q5TGL8 231 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 TEX38Q6PEX7 206 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 TREML4Q6UXN2 200 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 LCNL1Q6ZST4 164 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 FAM223AQ8IWN6 122 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 BPIFCQ8NFQ6 507 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 LINC01006Q8NI28 216 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 NPIPB3Q92617 1050 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 JMJD1CQ15652 2540 aa13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 NIPBLQ6KC79 2804 aaeCLIP13.88□□□□□ -0.19
PTCHD3-202ENST00000622555 TMEM89A2RUT3 159 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 FGF7P21781 194 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 PSMB8P28062 276 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 RAB9AP51151 201 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 TMEM144Q7Z5S9 345 aa13.87□□□□□ -0.19
PTCHD3-202ENST00000622555 HSD17B11Q8NBQ5 300 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms