RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 LOC107984640A0A0U1RRK4 108 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 LINC00862A6NCI5 91 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 GGT3PA6NGU5 568 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 GGTLC3B5MD39 225 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 C11orf94C9JXX5 98 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 SOCS1O15524 211 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF73O43830 326 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 SCO1O75880 301 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1-39P01597 117 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 MAS1P04201 325 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1D-39P04432 117 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 LINC00869P0C866 280 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF705DP0CH99 300 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF728P0DKX0 622 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 CASP1P29466 404 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 NUDT2P50583 147 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 TMBIM6P55061 237 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 CDK6Q00534 326 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 MSMO1Q15800 293 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM241Q24JQ0 296 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 CCSMST1Q4G0I0 132 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 LDLRAD2Q5SZI1 272 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 GLIPR1L1Q6UWM5 242 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 SCXQ7RTU7 201 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 PDPNQ86YL7 162 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 GPHB5Q86YW7 130 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 CTAGE3PQ8IX95 158 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 ORMDL3Q8N138 153 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 C10orf126Q8N4M7 172 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 MMGT1Q8N4V1 131 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 C15orf40Q8WUR7 153 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 PP6455Q8WZ26 134 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 RMI2Q96E14 147 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 NKX6-2Q9C056 277 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 FGF23Q9GZV9 251 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM133Q9H2Q1 129 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 OTORQ9NRC9 128 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 SCN3BQ9NY72 215 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 NAT8Q9UHE5 227 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 BOKQ9UMX3 212 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 BAIAP2Q9UQB8 552 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 KDM6AO15550 1401 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-229ENST00000621897 TNS2Q63HR2 1409 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 TRAPPC8Q9Y2L5 1435 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 MED14O60244 1454 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 ERICH3Q5RHP9 1530 aa2.31□□□□□ -2.04
BRCA1-229ENST00000621897 DSCAML1Q8TD84 2053 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 ATG2BQ96BY7 2078 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PIKFYVEQ9Y2I7 2098 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1D-43A0A0B4J1Z2 117 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1-6A0A0C4DH72 117 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM218A2RU14 115 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 C9JCJ5 164 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 INS-IGF2F8WCM5 200 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 NPFFO15130 113 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 CCL25O15444 150 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PLA2G10O15496 165 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 LYZL6O75951 148 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 SLC25A14O95258 325 aaPredicted RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 IGKV1-5P01602 117 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PAEPP09466 180 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 SEC11BP0C7V7 166 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 IGLC6P0CF74 106 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 LINC00694P0DN24 101 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 HIST1H1BP16401 226 aaKnown RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 NFYBP25208 207 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PSMB8P28062 276 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 EIF2B2P49770 351 aaKnown RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 CRISP3P54108 245 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 NDUFA6P56556 154 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 CCL20P78556 96 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PDGFRLQ15198 375 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF141Q15928 474 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 RPP25LQ8N5L8 163 aaKnown RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PPTC7Q8NI37 304 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 H1FXQ92522 213 aaKnown RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 AP1S3Q96PC3 154 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 TMEM191AQ9H0A3 160 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 TCEAL2Q9H3H9 227 aaPredicted RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 EFCAB1Q9HAE3 211 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 CKLFQ9UBR5 152 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 KLK5Q9Y337 293 aaPredicted RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 SOX21Q9Y651 276 aaPredicted RBP2.3□□□□□ -2.04
BRCA1-229ENST00000621897 CECR2Q9BXF3 1484 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 CCDC180Q9P1Z9 1646 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 KIAA1551Q9HCM1 1747 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 ATAD5Q96QE3 1844 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 TICRRQ7Z2Z1 1910 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 PLXNB3Q9ULL4 1909 aa2.3□□□□□ -2.04
BRCA1-229ENST00000621897 DOCK9Q9BZ29 2069 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 MYH9P35579 1960 aaKnown RBP2.29□□□□□ -2.04
BRCA1-229ENST00000621897 MYH7BA7E2Y1 1941 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 AKAP11Q9UKA4 1901 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 BCORL1Q5H9F3 1711 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 PIK3C2AO00443 1686 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 CUL7Q14999 1698 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV1-58A0A0C4DH39 117 aa2.29□□□□□ -2.04
BRCA1-229ENST00000621897 IGHV7-4-1A0A0J9YVY3 117 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms