RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	LINC00479	Q96M42	142 aa		11.82	□□□□□ -0.52
SMTN-223	ENST00000619644	IL19	Q9UHD0	177 aa		11.82	□□□□□ -0.52
SMTN-223	ENST00000619644	PTPRB	P23467	1997 aa		11.82	□□□□□ -0.52
SMTN-223	ENST00000619644	F2RL2	O00254	374 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	IGLV1-44	P01699	117 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	REG1A	P05451	166 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	APELA	P0DMC3	54 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	TNFSF4	P23510	183 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	CDC42EP3	Q9UKI2	254 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	PTPRZ1	P23471	2315 aa	Predicted RBP	11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	SRRM4	A7MD48	611 aa	Known RBP	11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	AMY1A	P04745	511 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	RTL8B	Q17RB0	113 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	OR2D3	Q8NGH3	330 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	OR2T6	Q8NHC8	308 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	H1FX	Q92522	213 aa	Known RBP	11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	TECR	Q9NZ01	308 aa	Known RBP	11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	RNF7	Q9UBF6	113 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	DKK4	Q9UBT3	224 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	FAM90A9P	A6NNJ1	464 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	COMMD5	Q9GZQ3	224 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	TMEM14B	Q9NUH8	114 aa		11.81	□□□□□ -0.52
SMTN-223	ENST00000619644	IGKV1OR2-108	A0A075B7D4	117 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	IGHV1-69-2	A0A0G2JMI3	117 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	HLA-DQA1	P01909	254 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	PMCHL1	Q16048	86 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	ERAS	Q7Z444	233 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	ZNF439	Q8NDP4	499 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	OR5B3	Q8NH48	314 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	DDB2	Q92466	427 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	CORO2A	Q92828	525 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	TRGV8	A0A0C4DH27	118 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	IGLC7	A0M8Q6	106 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644		M0QZ24	198 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	BPIFB3	P59826	476 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	UBE2L3	P68036	154 aa	Known RBP	11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	FAM27E3	Q08E93	113 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	GUSBP1	Q15486	140 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	PLA2G2C	Q5R387	149 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	LOXL4	Q96JB6	756 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	HARBI1	Q96MB7	349 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	PRND	Q9UKY0	176 aa		11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	FOXA2	Q9Y261	457 aa	Predicted RBP	11.8	□□□□□ -0.52
SMTN-223	ENST00000619644	TMPRSS3	P57727	454 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	COX19	Q49B96	90 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644		Q56UQ5	140 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	OR4F17	Q8NGA8	305 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	TMEM167B	Q9NRX6	74 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	APCS	P02743	223 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	LINC00869	P0C866	280 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	SAA1	P0DJI8	122 aa	Predicted RBP	11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	IBA57	Q5T440	356 aa	Known RBP	11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	TANC2	Q9HCD6	1990 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	CCL3L1	P16619	93 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	VAMP3	Q15836	100 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	C18orf32	Q8TCD1	76 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	GSX1	Q9H4S2	264 aa	Predicted RBP	11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	OSTC	Q9NRP0	149 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	RNF24	Q9Y225	148 aa		11.79	□□□□□ -0.52
SMTN-223	ENST00000619644	ATM	Q13315	3056 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	TRAV9-2	A0A087WT02	112 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	TEX50	A0A1B0GTY4	177 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	GGTLC3	B5MD39	225 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PYY	P10082	97 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	IGLL1	P15814	213 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	TAS2R45	P59539	299 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	SLA	Q13239	276 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	C10orf55	Q5SWW7	151 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	CT45A6	P0DMU7	189 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	CT45A5	P0DMU8	189 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	CT45A7	P0DMV0	189 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	GLRX	P35754	106 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PRR20E	P86478	221 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PRR20C	P86479	221 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PRR20D	P86480	221 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PRR20B	P86481	221 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PRR20A	P86496	221 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	MORN5	Q5VZ52	161 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	SEM1	Q6ZVN7	128 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	ZGRF1	Q86YA3	2104 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	MUC15	Q8N387	334 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	PNKD	Q8N490	385 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	RAB9B	Q9NP90	201 aa		11.78	□□□□□ -0.52
SMTN-223	ENST00000619644	IGHV3-21	A0A0B4J1V1	117 aa		11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	AREG	P15514	252 aa		11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	TNXA	Q16473	311 aa		11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	TP73-AS1	Q9UF72	201 aa		11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	OTOGL	Q3ZCN5	2332 aa		11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	KALRN	O60229	2985 aa		11.77	□□□□□ -0.52
SMTN-223	ENST00000619644	UPK2	O00526	184 aa		11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	USF1	P22415	310 aa	Predicted RBP	11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	PRB3	Q04118	309 aa	Predicted RBP	11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	AARD	Q4LEZ3	155 aa		11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	EBLN2	Q6P2I7	272 aa		11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	ZADH2	Q8N4Q0	377 aa		11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	BLNK	Q8WV28	456 aa		11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	NEUROG1	Q92886	237 aa		11.77	□□□□□ -0.53
SMTN-223	ENST00000619644	ADTRP	Q96IZ2	230 aa		11.77	□□□□□ -0.53

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