RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MISP3Q96FF7 219 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 FAM103A1Q9BTL3 118 aaKnown RBP10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 HIF1ANQ9NWT6 349 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 MLXQ9UH92 298 aa10.12□□□□□ -0.79
TNFAIP3-209ENST00000619035 ABCA12Q86UK0 2595 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGKV1OR2-108A0A075B7D4 117 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 FNDC10F2Z333 226 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 NDUFA3O95167 84 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 FAM106CPP0CH98 169 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 B2MP61769 119 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 MEF2BQ02080 365 aaPredicted RBP10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 RAB31Q13636 194 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 C5orf64Q2M2E5 130 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 ZNF343Q6P1L6 599 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 STPG3Q8N7X2 389 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR4F5Q8NH21 305 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 RPUSD4Q96CM3 377 aaKnown RBP10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 TVP23CQ96ET8 276 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR4F4Q96R69 305 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
TNFAIP3-209ENST00000619035 TRAV20A0A0B4J274 112 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 A0A1W2PPV4 95 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 IFNA1P01562 189 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 BRS3P32247 399 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 PRSS57Q6UWY2 283 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 SLC35E3Q7Z769 313 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 SLC35E1Q96K37 410 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 SEPSECSQ9HD40 501 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 URGCP-MRPS24S4R325 110 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 SEC14L6B5MCN3 397 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR2C1O95371 312 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGHV4-38-2P0DP08 117 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 PSMB3P49720 205 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 FXYD3Q14802 87 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 RBMS3Q6XE24 437 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 C15orf54Q8N8G6 183 aa10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 RNASEH2CQ8TDP1 164 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 SRSF8Q9BRL6 282 aaKnown RBP10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 FNDC4Q9H6D8 234 aaPredicted RBP10.1□□□□□ -0.79
TNFAIP3-209ENST00000619035 DOPEY2Q9Y3R5 2298 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 IGHV3-21A0A0B4J1V1 117 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 ARL14EPLP0DKL9 152 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 MFAP2P55001 183 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 LOXL1Q08397 574 aaPredicted RBP10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 Q8N6K4 173 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 KCNIP2Q9NS61 270 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 CELSR1Q9NYQ6 3014 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR10J1P30954 320 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 ATP5G3P48201 142 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 OR51G1Q8NGK1 321 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 CACNG8Q8WXS5 425 aa10.09□□□□□ -0.79
TNFAIP3-209ENST00000619035 A0A096LNT2 108 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 LINC00869P0C866 280 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 GPX4P36969 197 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 CX3CL1P78423 397 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 Q5PR19 223 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 CST9LP1Q5W188 147 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 NPIPB3Q92617 1050 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 SAV1Q9H4B6 383 aaPredicted RBP10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 F11RQ9Y624 299 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 TSPAN9O75954 239 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 NPPCP23582 126 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 LINC01356Q8N9X3 169 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 ZNF114Q8NC26 417 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 OR1P1Q8NH06 330 aa10.08□□□□□ -0.8
TNFAIP3-209ENST00000619035 NBPF19A0A087WUL8 3843 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 C11orf94C9JXX5 98 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 J3QLI3 93 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 RPL29P47914 159 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 RND2P52198 227 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PMS2P11Q13670 270 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 SPNS3Q6ZMD2 512 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 ARPC1AQ92747 370 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 SSX3Q99909 188 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 SLC25A33Q9BSK2 321 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PARLQ9H300 379 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 TUBA4BQ9H853 241 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 SDF2L1Q9HCN8 221 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 MANBALQ9NQG1 85 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 C1RLQ9NZP8 487 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 MRPL36Q9P0J6 103 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 SOX21Q9Y651 276 aaPredicted RBP10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 NAV2Q8IVL1 2488 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PRR20EP86478 221 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PRR20CP86479 221 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PRR20DP86480 221 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PRR20BP86481 221 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 PRR20AP86496 221 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 NDPQ00604 133 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 FLI1Q01543 452 aaPredicted RBP10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 ZNF562Q6V9R5 426 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 MIR17HGQ75NE6 70 aa10.07□□□□□ -0.8
TNFAIP3-209ENST00000619035 YPEL4Q96NS1 127 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms