RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 Q6ZR03 302 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 ATOH7Q8N100 152 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
CNOT3-210ENST00000618939 TCRBV4S1A1TA0A5B7 111 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 MYOD1P15172 320 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 PRB3Q04118 309 aaPredicted RBP11.44□□□□□ -0.58
CNOT3-210ENST00000618939 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 NEU1Q99519 415 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 FGF23Q9GZV9 251 aaPredicted RBP11.44□□□□□ -0.58
CNOT3-210ENST00000618939 DNAH12Q6ZR08 3092 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM131Q92545 1883 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 IFITM10A6NMD0 228 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 J3KRW8 73 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 BMI1P35226 326 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 FOXL1Q12952 345 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 DPRXA6NFQ7 191 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 OR2T8A6NH00 312 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 FAM169BQ8N8A8 192 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 GPR82Q96P67 336 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 SLC25A33Q9BSK2 321 aa11.44□□□□□ -0.58
CNOT3-210ENST00000618939 IGKV3-7A0A075B6H7 116 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
CNOT3-210ENST00000618939 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 ZNF726P1Q15940 193 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 DTX1Q86Y01 620 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 CHODLQ9H9P2 273 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 TWIST1Q15672 202 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 KRTAP27-1Q3LI81 207 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 HINT1P49773 126 aaPredicted RBP11.43□□□□□ -0.58
CNOT3-210ENST00000618939 GNG5P63218 68 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 GAFA1Q96PS6 74 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 S4R3C0 116 aa11.43□□□□□ -0.58
CNOT3-210ENST00000618939 CBY3A6NI87 242 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 HAPLN4Q86UW8 402 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 PPP1R27Q86WC6 154 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 NDUFAF3Q9BU61 184 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 TRAV5A0A0B4J249 113 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 HIGD1CA8MV81 97 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 Q6ZS92 163 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 RPP21Q9H633 154 aaKnown RBP11.42□□□□□ -0.58
CNOT3-210ENST00000618939 LYNX1G3V0Z9 82 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 LYNX1P0DP58 116 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 CKS2P33552 79 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 FAM19A2Q8N3H0 131 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 Q9H3A6 140 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 MED13LQ71F56 2210 aa11.42□□□□□ -0.58
CNOT3-210ENST00000618939 C9JCJ5 164 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 WNT10AQ9GZT5 417 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 USF3Q68DE3 2245 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 CEP350Q5VT06 3117 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 FOXH1O75593 365 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 PSG9Q00887 426 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM78Q5T7P6 136 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM200BQ69YZ2 307 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 TEX45Q8NA69 505 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 GOLT1BQ9Y3E0 138 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 F5H697 171 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 FMC1Q96HJ9 113 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 KCNS1Q96KK3 526 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 EPDR1Q9UM22 224 aa11.41□□□□□ -0.58
CNOT3-210ENST00000618939 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 PLA2G2CQ5R387 149 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 SPANXN1Q5VSR9 72 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 TMEM178BH3BS89 294 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 AREGP15514 252 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 CTAG1AP78358 180 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 LEMD1Q68G75 181 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 SLC25A48Q6ZT89 311 aaKnown RBP11.4□□□□□ -0.58
CNOT3-210ENST00000618939 GNB1LQ9BYB4 327 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.58
CNOT3-210ENST00000618939 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 CA1P00915 261 aaPredicted RBP11.4□□□□□ -0.58
CNOT3-210ENST00000618939 BTF3P20290 206 aaKnown RBP11.4□□□□□ -0.58
CNOT3-210ENST00000618939 ATG101Q9BSB4 218 aa11.4□□□□□ -0.58
CNOT3-210ENST00000618939 CENPFP49454 3210 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 IGKV1-16P04430 117 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 KLRB1Q12918 225 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 ACTL10Q5JWF8 245 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 TMEM167AQ8TBQ9 72 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 METTL26Q96S19 204 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 PFN1P07737 140 aaKnown RBP11.39□□□□□ -0.59
CNOT3-210ENST00000618939 RELQ04864 619 aaPredicted RBP11.39□□□□□ -0.59
CNOT3-210ENST00000618939 TMEM70Q9BUB7 260 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 ZFP30Q9Y2G7 519 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 TNFSF13O75888 250 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 SFTPCP11686 197 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
CNOT3-210ENST00000618939 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 AP5S1Q9NUS5 200 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
CNOT3-210ENST00000618939 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
CNOT3-210ENST00000618939 MED13Q9UHV7 2174 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms