RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 GNG7O60262 68 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 PITX3O75364 302 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 ADAP1O75689 374 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 BTNL8Q6UX41 500 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 WDR89Q96FK6 387 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-211ENST00000615061 TXN2Q99757 166 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 PALMDQ9NP74 551 aa12.62□□□□□ -0.39
CBWD3-211ENST00000615061 ZNF785A8K8V0 405 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 DCTN2Q13561 401 aaKnown RBP12.61□□□□□ -0.39
CBWD3-211ENST00000615061 C2orf83Q53S99 150 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 DUSP18Q8NEJ0 188 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 DTD1Q8TEA8 209 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 S100ZQ8WXG8 99 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 HIPK2Q9H2X6 1198 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 GAR1Q9NY12 217 aaKnown RBP12.61□□□□□ -0.39
CBWD3-211ENST00000615061 UFC1Q9Y3C8 167 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 MPTX1A8MV57 137 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 CORTO00230 105 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 C8orf88P0DMB2 117 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 C4orf46Q504U0 113 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 TMEM61Q8N0U2 210 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 OR52B4Q8NGK2 314 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 ASCL2Q99929 193 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 TECRQ9NZ01 308 aaKnown RBP12.61□□□□□ -0.39
CBWD3-211ENST00000615061 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
CBWD3-211ENST00000615061 TRAV6A0A075B6T7 132 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 YIF1AO95070 293 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 TCRBP04435 133 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 NPY1RP25929 384 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 NPBWR1P48145 328 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 OR2K2Q8NGT1 345 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
CBWD3-211ENST00000615061 BATF3Q9NR55 127 aa12.6□□□□□ -0.39
CBWD3-211ENST00000615061 PIGBOS1A0A0B4J2F0 54 aa12.59□□□□□ -0.39
CBWD3-211ENST00000615061 TMEM50AO95807 157 aa12.59□□□□□ -0.39
CBWD3-211ENST00000615061 IFNA10P01566 189 aa12.59□□□□□ -0.39
CBWD3-211ENST00000615061 ELLP55199 621 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-211ENST00000615061 RELQ04864 619 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-211ENST00000615061 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
CBWD3-211ENST00000615061 MRPL27Q9P0M9 148 aaKnown RBP12.59□□□□□ -0.39
CBWD3-211ENST00000615061 CACFD1Q9UGQ2 172 aa12.59□□□□□ -0.39
CBWD3-211ENST00000615061 SCAF4O95104 1147 aaKnown RBP12.58□□□□□ -0.39
CBWD3-211ENST00000615061 CD7P09564 240 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 FRMD6-AS1P0C7T7 363 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 IGHV4-30-4P0DP06 118 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 IAPPP10997 89 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 SLC25A6P12236 298 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 MARC2Q969Z3 335 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 NUDT15Q9NV35 164 aa12.58□□□□□ -0.39
CBWD3-211ENST00000615061 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 CLN5O75503 358 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 IFITM3Q01628 133 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 PRSS54Q6PEW0 395 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 COQ8AQ8NI60 647 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 OR10C1Q96KK4 312 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 U3KQ87 197 aa12.58□□□□□ -0.4
CBWD3-211ENST00000615061 C15orf62A8K5M9 175 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 RND2P52198 227 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 CD81P60033 236 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 ZNF846Q147U1 533 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 GTSCR1Q86UQ5 136 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 RNASEH2CQ8TDP1 164 aaKnown RBP12.57□□□□□ -0.4
CBWD3-211ENST00000615061 WDR12Q9GZL7 423 aaKnown RBP12.57□□□□□ -0.4
CBWD3-211ENST00000615061 WFDC10AQ9H1F0 79 aa12.57□□□□□ -0.4
CBWD3-211ENST00000615061 PUS1Q9Y606 427 aaKnown RBP eCLIP12.57□□□□□ -0.4
CBWD3-211ENST00000615061 IGHV3OR16-13A0A075B7E8 117 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 K7EMT4 169 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 TIGITQ495A1 244 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 ZFAND3Q9H8U3 227 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 RPS10-NUDT3A0A1W2PQS6 291 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 UPK1BO75841 260 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 ASAH1Q13510 395 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 ZNF600Q6ZNG1 722 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 MITD1Q8WV92 249 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 NEURL2Q9BR09 285 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 SEC22CQ9BRL7 303 aa12.56□□□□□ -0.4
CBWD3-211ENST00000615061 FAM240BA0A1B0GVZ2 78 aa12.55□□□□□ -0.4
CBWD3-211ENST00000615061 FAM90A26D6RGX4 464 aa12.55□□□□□ -0.4
CBWD3-211ENST00000615061 WRBO00258 174 aa12.55□□□□□ -0.4
CBWD3-211ENST00000615061 SMPXQ9UHP9 88 aa12.55□□□□□ -0.4
CBWD3-211ENST00000615061 IGHV7-4-1A0A0J9YVY3 117 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 SYNGR2O43760 224 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 APOHP02749 345 aaPredicted RBP12.54□□□□□ -0.4
CBWD3-211ENST00000615061 IFNA4P05014 189 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 RBPMS2Q6ZRY4 209 aaKnown RBP12.54□□□□□ -0.4
CBWD3-211ENST00000615061 SLC16A13Q7RTY0 426 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 TMEM116Q8NCL8 245 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 NPIPB3Q92617 1050 aa12.54□□□□□ -0.4
CBWD3-211ENST00000615061 ACY3Q96HD9 319 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms