RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 COLCA1Q6ZS62 124 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 COLCA2A8K830 154 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 RAMP3O60896 148 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 IGKV1D-33P01593 117 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 IGKV1-33P01594 117 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 C1QTNF9P0C862 333 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 HTN1P15515 57 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 EGR1P18146 543 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 DLX6P56179 175 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 TMEM14EPQ6UXP3 125 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 ARPC1AQ92747 370 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 SLC25A15Q9Y619 301 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 SEC16AO15027 2179 aa12.21□□□□□ -0.45
SNPH-203ENST00000614659 ZNF672Q499Z4 452 aaPredicted RBP12.21□□□□□ -0.46
SNPH-203ENST00000614659 ARID1AO14497 2285 aa12.21□□□□□ -0.46
SNPH-203ENST00000614659 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 CD69Q07108 199 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 MESP1Q9BRJ9 268 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 TMEM133Q9H2Q1 129 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 NPIPB6E9PJ23 425 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 TFPI2P48307 235 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 C3orf36Q3SXR2 165 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 OR9G9P0C7N8 305 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 PPP1R17O96001 155 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 STAG3L3P0CL85 134 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H1AQ02539 215 aaPredicted RBP12.2□□□□□ -0.46
SNPH-203ENST00000614659 TCF15Q12870 199 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 FOXF2Q12947 444 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 LAMTOR2Q9Y2Q5 125 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 LY96Q9Y6Y9 160 aa12.2□□□□□ -0.46
SNPH-203ENST00000614659 Q6P435 159 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 IGHV1-46P01743 117 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 C19orf54Q5BKX5 351 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 NEUROG1Q92886 237 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 LINC01356Q8N9X3 169 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 EAF1Q96JC9 268 aaPredicted RBP12.19□□□□□ -0.46
SNPH-203ENST00000614659 GNB1LQ9BYB4 327 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 OR10J3Q5JRS4 329 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 MINOS1Q5TGZ0 78 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 MINOS1-NBL1R4GNA1 71 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 SPTA1P02549 2419 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 OR11H12B2RN74 326 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 OR11H1Q8NG94 326 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 OR11H2Q8NH07 326 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 SPCS1Q9Y6A9 102 aa12.19□□□□□ -0.46
SNPH-203ENST00000614659 TCF20Q9UGU0 1960 aaKnown RBP12.19□□□□□ -0.46
SNPH-203ENST00000614659 SLC17A3O00476 420 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 PRDM13Q9H4Q3 707 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 C21orf62Q9NYP8 219 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 PRSS8Q16651 343 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 DTX1Q86Y01 620 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 TTC9CQ8N5M4 171 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 VOPP1Q96AW1 172 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 RSPO3Q9BXY4 272 aaPredicted RBP12.18□□□□□ -0.46
SNPH-203ENST00000614659 FBXL15Q9H469 300 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 C9JCJ5 164 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 NBR2O15453 112 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 WNT2P09544 360 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 RPUSD1Q9UJJ7 312 aaKnown RBP12.18□□□□□ -0.46
SNPH-203ENST00000614659 C8orf46Q8TAG6 207 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 Q9H3A6 140 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
SNPH-203ENST00000614659 ITGB1BP1O14713 200 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 EFNB3Q15768 340 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 FAM201AQ5SY85 155 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 ATP5L2Q7Z4Y8 100 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 VCX2Q9H322 139 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
SNPH-203ENST00000614659 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 RNF5Q99942 180 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 AHCTF1Q8WYP5 2266 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BKO60814 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 TSPAN13O95857 204 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BJP06899 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BOP23527 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BBP33778 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BDP58876 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BCP62807 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST2H2BEQ16778 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 Q5PR19 223 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BHQ93079 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BNQ99877 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 HIST1H2BMQ99879 126 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
SNPH-203ENST00000614659 ANAPC1Q9H1A4 1944 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 A0A1B0GWB2 263 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 M0R1W7 72 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 FOXA3P55318 350 aaPredicted RBP12.17□□□□□ -0.46
SNPH-203ENST00000614659 FOXL1Q12952 345 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 FBXL7Q9UJT9 491 aa12.17□□□□□ -0.46
SNPH-203ENST00000614659 LY6G6EA0A0G2JKS1 128 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 U3KQA8 63 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 HEATR5BQ9P2D3 2071 aa12.16□□□□□ -0.46
SNPH-203ENST00000614659 PRSS2P07478 247 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms