RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ZNF788Q6ZQV5 615 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 SMIM15Q7Z3B0 74 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 KLHDC1Q8N7A1 406 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 CT45A3Q8NHU0 189 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 SAP30LQ9HAJ7 183 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 SELENOKQ9Y6D0 94 aa13.46□□□□□ -0.25
CNOT3-208ENST00000613073 RRHO14718 337 aa13.46□□□□□ -0.26
CNOT3-208ENST00000613073 RAB29O14966 203 aa13.46□□□□□ -0.26
CNOT3-208ENST00000613073 OR9G9P0C7N8 305 aa13.46□□□□□ -0.26
CNOT3-208ENST00000613073 NIT1Q86X76 327 aa13.46□□□□□ -0.26
CNOT3-208ENST00000613073 Q8TCH9 128 aa13.46□□□□□ -0.26
CNOT3-208ENST00000613073 ABCA4P78363 2273 aa13.46□□□□□ -0.26
CNOT3-208ENST00000613073 TACC2O95359 2948 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 DCHS2Q6V1P9 2916 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 PMS2P5A8MQ11 134 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 ZNF324O75467 553 aaPredicted RBP13.45□□□□□ -0.26
CNOT3-208ENST00000613073 RPL31P62899 125 aaKnown RBP13.45□□□□□ -0.26
CNOT3-208ENST00000613073 ZNF596Q8TC21 504 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 BORCS7Q96B45 105 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 ZNRD1Q9P1U0 126 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 CA2P00918 260 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 VKORC1Q9BQB6 163 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 CLEC7AQ9BXN2 247 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 CST9LQ9H4G1 147 aa13.45□□□□□ -0.26
CNOT3-208ENST00000613073 YTHDF2Q9Y5A9 579 aaKnown RBP13.45□□□□□ -0.26
CNOT3-208ENST00000613073 FAM90A27PA6NNH2 459 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 PRRX1P54821 245 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 ZC2HC1AQ96GY0 325 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
CNOT3-208ENST00000613073 SAA2-SAA4A0A096LPE2 208 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 TMEM238LA0A1B0GVL6 79 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 C17orf112F2Z3M2 114 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 SAA2P0DJI9 122 aaPredicted RBP13.44□□□□□ -0.26
CNOT3-208ENST00000613073 OCIAD2Q56VL3 154 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 PRAMEF5Q5TYX0 476 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 LINC01560Q8TB33 94 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 S1PR3Q99500 378 aa13.44□□□□□ -0.26
CNOT3-208ENST00000613073 E7EQL1 145 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 RPL19P84098 196 aaKnown RBP13.43□□□□□ -0.26
CNOT3-208ENST00000613073 TEX36Q5VZQ5 186 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 RNASE7Q9H1E1 156 aaKnown RBP13.43□□□□□ -0.26
CNOT3-208ENST00000613073 TRAV3A0A0B4J244 114 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 SHISA9B4DS77 424 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 GRNP28799 593 aaKnown RBP13.43□□□□□ -0.26
CNOT3-208ENST00000613073 NCOR1P1Q9H4R4 102 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 PPBPP02775 128 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 OR4A47Q6IF82 309 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 DYNLRB1Q9NP97 96 aa13.43□□□□□ -0.26
CNOT3-208ENST00000613073 SLC25A10Q9UBX3 287 aaPredicted RBP13.43□□□□□ -0.26
CNOT3-208ENST00000613073 ARFGEF3Q5TH69 2177 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 IGHV2-26A0A0B4J1V2 119 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 A0A1W2PN81 502 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 OR2T8A6NH00 312 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 PLAUP00749 431 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 IGLL1P15814 213 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 MIC13Q5XKP0 118 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 TSKUQ8WUA8 353 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 SSMEM1Q8WWF3 244 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 RNASE6Q93091 150 aaKnown RBP13.42□□□□□ -0.26
CNOT3-208ENST00000613073 NGBQ9NPG2 151 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 IGLC7A0M8Q6 106 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 MPV17L2Q567V2 206 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 Q8N7P7 452 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 IDI2-AS1Q9NZ38 188 aa13.42□□□□□ -0.26
CNOT3-208ENST00000613073 MRPS16Q9Y3D3 137 aaKnown RBP13.42□□□□□ -0.26
CNOT3-208ENST00000613073 FCN3O75636 299 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 RIPPLY3P57055 190 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 SPATA31B1PQ5VZV4 182 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 LYPD2Q6UXB3 125 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 OR4A16Q8NH70 328 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 PPIAL4EA0A075B759 164 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 IGHV1-69-2A0A0G2JMI3 117 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.41□□□□□ -0.26
CNOT3-208ENST00000613073 VSTM5A8MXK1 200 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 PPIAL4DF5H284 164 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 TMEM178BH3BS89 294 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 BMPR1BO00238 502 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 CCL21O00585 134 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 PPIAL4FP0DN26 164 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 CCL3L1P16619 93 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 OR4F17Q8NGA8 305 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 OR2D3Q8NGH3 330 aa13.41□□□□□ -0.26
CNOT3-208ENST00000613073 TRAV30A0A087WSZ9 112 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 CA1P00915 261 aaPredicted RBP13.4□□□□□ -0.26
CNOT3-208ENST00000613073 CD1BP29016 333 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 ERVK-16P61578 105 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 H1FXQ92522 213 aaKnown RBP13.4□□□□□ -0.26
CNOT3-208ENST00000613073 RPH3ALQ9UNE2 315 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 WASHC3Q9Y3C0 194 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 V9GYV3 84 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 TET2Q6N021 2002 aaPredicted RBP13.4□□□□□ -0.26
CNOT3-208ENST00000613073 UCNP55089 124 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 TMEM136Q6ZRR5 245 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 EAF1Q96JC9 268 aaPredicted RBP13.4□□□□□ -0.26
CNOT3-208ENST00000613073 GNB1LQ9BYB4 327 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 RAB9BQ9NP90 201 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 SERTAD4Q9NUC0 356 aa13.4□□□□□ -0.26
CNOT3-208ENST00000613073 TMEM140Q9NV12 185 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms