RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 RABAC1Q9UI14 185 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 SOX21Q9Y651 276 aaPredicted RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 MGPP08493 103 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 GNG5P63218 68 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 ZCCHC24Q8N2G6 241 aaKnown RBP10.28□□□□□ -0.76
CDH1-212ENST00000611625 PLSCR4Q9NRQ2 329 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 FMC1Q96HJ9 113 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 ZNF257Q9Y2Q1 563 aa10.28□□□□□ -0.76
CDH1-212ENST00000611625 A0A1B0GUT8 65 aa10.27□□□□□ -0.76
CDH1-212ENST00000611625 TCRBV4S1A1TA0A5B7 111 aa10.27□□□□□ -0.76
CDH1-212ENST00000611625 OR4C46A6NHA9 309 aa10.27□□□□□ -0.76
CDH1-212ENST00000611625 IGHV1-46P01743 117 aa10.27□□□□□ -0.76
CDH1-212ENST00000611625 ACTL10Q5JWF8 245 aa10.27□□□□□ -0.76
CDH1-212ENST00000611625 Q9H3A6 140 aa10.27□□□□□ -0.76
CDH1-212ENST00000611625 DOCK10Q96BY6 2186 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 GFRA3O60609 400 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
CDH1-212ENST00000611625 OR10W1Q8NGF6 305 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 RELQ04864 619 aaPredicted RBP10.27□□□□□ -0.77
CDH1-212ENST00000611625 ALPK3Q96L96 1907 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 IGHV3-35A0A0C4DH35 117 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 C9JCJ5 164 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 TEX45Q8NA69 505 aa10.27□□□□□ -0.77
CDH1-212ENST00000611625 RBPMS2Q6ZRY4 209 aaKnown RBP10.26□□□□□ -0.77
CDH1-212ENST00000611625 TMEM256Q8N2U0 113 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
CDH1-212ENST00000611625 LOC105371242A0A075B767 164 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 ANOS1P23352 680 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 TCF24Q7RTU0 167 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 METTL26Q96S19 204 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 DPM3Q9P2X0 92 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 EPDR1Q9UM22 224 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 CA1P00915 261 aaPredicted RBP10.26□□□□□ -0.77
CDH1-212ENST00000611625 IGKV1-39P01597 117 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 IGKV1D-39P04432 117 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 SAPCD1Q5SSQ6 148 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 TMEM136Q6ZRR5 245 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 S4R3C0 116 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 PCNX1Q96RV3 2341 aa10.26□□□□□ -0.77
CDH1-212ENST00000611625 PCP4P48539 62 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 C2orf83Q53S99 150 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 CYB5R2Q6BCY4 276 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 ZNF841Q6ZN19 808 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 LINC01560Q8TB33 94 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 C16orf92Q96LL3 132 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 OBSL1O75147 1896 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 IGHV2-5P01817 119 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 HERVK_113P61574 105 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 C10orf55Q5SWW7 151 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 SSC4DQ8WTU2 575 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 RNF138Q8WVD3 245 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 SLC25A15Q9Y619 301 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 UCNP55089 124 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 LYRM7Q5U5X0 104 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 LEMD1Q68G75 181 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 ST6GALNAC6Q969X2 333 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 CRIM1Q9NZV1 1036 aa10.25□□□□□ -0.77
CDH1-212ENST00000611625 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 PFN1P07737 140 aaKnown RBP10.24□□□□□ -0.77
CDH1-212ENST00000611625 RNFT1Q5M7Z0 435 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 LAMTOR2Q9Y2Q5 125 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 KIF26AQ9ULI4 1882 aaPredicted RBP10.24□□□□□ -0.77
CDH1-212ENST00000611625 ABCA1O95477 2261 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 APOHP02749 345 aaPredicted RBP10.24□□□□□ -0.77
CDH1-212ENST00000611625 OR10J3Q5JRS4 329 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 ZNF503-AS2A6NEH8 195 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 FOXH1O75593 365 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 AREGP15514 252 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 CX3CL1P78423 397 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 SRSF9Q13242 221 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDH1-212ENST00000611625 ZNF726P1Q15940 193 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.24□□□□□ -0.77
CDH1-212ENST00000611625 LOXL3P58215 753 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 CYYR1Q96J86 154 aa10.24□□□□□ -0.77
CDH1-212ENST00000611625 SPTAN1Q13813 2472 aaKnown RBP10.24□□□□□ -0.77
CDH1-212ENST00000611625 MYOD1P15172 320 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 OTORQ9NRC9 128 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 IGKV3-15P01624 115 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 RAB9AP51151 201 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 DNLZQ5SXM8 178 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 ABHD17AQ96GS6 310 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 TNFSF13O75888 250 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 IGKV1D-33P01593 117 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 IGKV1-33P01594 117 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 GZMBP10144 247 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 C1orf194Q5T5A4 169 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 PPP1R27Q86WC6 154 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 PRELID3AQ96N28 172 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 LY96Q9Y6Y9 160 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 GCSHP23434 173 aa10.23□□□□□ -0.77
CDH1-212ENST00000611625 PRB3Q04118 309 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms