RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	COQ2	Q96H96	371 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	COL4A3	Q01955	1670 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	TICRR	Q7Z2Z1	1910 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	IGHV3OR16-10	A0A075B7F0	116 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	PPIAL4C	A0A0B4J2A2	164 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF207	O43670	478 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	MGP	P08493	103 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	PPIAL4G	P0DN37	164 aa		11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	HOXB1	P14653	301 aa	Predicted RBP	11.49	□□□□□ -0.57
MUC1-223	ENST00000611571	GOSR1	O95249	250 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571		Q1RN00	199 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	SPANXN1	Q5VSR9	72 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	SCGB1D4	Q6XE38	83 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	CD177	Q8N6Q3	437 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	AGMAT	Q9BSE5	352 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	PEX7	O00628	323 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	TBR1	Q16650	682 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571		Q6P435	159 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	SLC25A34	Q6PIV7	304 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	IGKV1D-33	P01593	117 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	IGKV1-33	P01594	117 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	TIMM23B	Q5SRD1	257 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	TMEM144	Q7Z5S9	345 aa		11.48	□□□□□ -0.57
MUC1-223	ENST00000611571	IGHV1-18	A0A0C4DH31	117 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	MLNR	O43193	412 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	CHD3	Q12873	2000 aa	Known RBP	11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	LBH	Q53QV2	105 aa	Predicted RBP	11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	DTX1	Q86Y01	620 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	OR52E5	Q8NH55	327 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	MCRIP2	Q9BUT9	160 aa	Known RBP	11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	F2RL2	O00254	374 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	CDX4	O14627	284 aa	Predicted RBP	11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	IGKV1-39	P01597	117 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	IGKV1D-39	P04432	117 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	GZMB	P10144	247 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	GCSH	P23434	173 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	IL15RA	Q13261	267 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	ASCL2	Q99929	193 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	SEMA5B	Q9P283	1151 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	RABAC1	Q9UI14	185 aa		11.47	□□□□□ -0.57
MUC1-223	ENST00000611571	TRAV1-1	A0A0B4J248	108 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	BSPH1	Q075Z2	132 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	FOXA2	Q9Y261	457 aa	Predicted RBP	11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	ABCA2	Q9BZC7	2435 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	C15orf61	A6NNL5	157 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571		J3QW42	95 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	COTL1	Q14019	142 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	ZNF726P1	Q15940	193 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	ARL6IP6	Q8N6S5	226 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	MGST2	Q99735	147 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	SLC25A33	Q9BSK2	321 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	AP5S1	Q9NUS5	200 aa		11.46	□□□□□ -0.57
MUC1-223	ENST00000611571	C2orf83	Q53S99	150 aa		11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	FAM90A1	Q86YD7	464 aa		11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	TLN2	Q9Y4G6	2542 aa		11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	CA7	P43166	264 aa		11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	KIR2DL2	P43627	348 aa	Predicted RBP	11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	HBB	P68871	147 aa		11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	TMEM70	Q9BUB7	260 aa		11.46	□□□□□ -0.58
MUC1-223	ENST00000611571	ALPK3	Q96L96	1907 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	GAGE10	A6NGK3	116 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	C15orf62	A8K5M9	175 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571		J3QR89	54 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	YPEL1	O60688	119 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	PLA2G5	P39877	138 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	ASCL5	Q7RTU5	278 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	YPEL2	Q96QA6	119 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	IGHV1-69-2	A0A0G2JMI3	117 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	STAG3L2	P0CL84	134 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	STAG3L3	P0CL85	134 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	TMEM136	Q6ZRR5	245 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	SFXN3	Q9BWM7	321 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571		M0QZ24	198 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	ASCL4	Q6XD76	172 aa		11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	OSR1	Q8TAX0	266 aa	Predicted RBP	11.45	□□□□□ -0.58
MUC1-223	ENST00000611571	UPK2	O00526	184 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	TMEM97	Q5BJF2	176 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	MED12L	Q86YW9	2145 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	ZNF502	Q8TBZ5	544 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	TMEM186	Q96B77	213 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	RNF115	Q9Y4L5	304 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	HLA-DRB1	P01911	266 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	IGKV1-16	P04430	117 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	MIEN1	Q9BRT3	115 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	PRDM13	Q9H4Q3	707 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	FRMPD3	Q5JV73	1810 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	DLX1	P56177	255 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	UNQ5815/PRO19632	Q6UWF5	114 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	WDR31	Q8NA23	367 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	TMEM242	Q9NWH2	141 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	LAMTOR2	Q9Y2Q5	125 aa		11.44	□□□□□ -0.58
MUC1-223	ENST00000611571	TRAV8-1	A0A0A6YYK1	113 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	EREG	O14944	169 aa		11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	APOH	P02749	345 aa	Predicted RBP	11.43	□□□□□ -0.58
MUC1-223	ENST00000611571	PPIF	P30405	207 aa	Known RBP	11.43	□□□□□ -0.58

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