RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 IGHV1-3A0A0C4DH29 117 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 SRP19P09132 144 aaKnown RBP5.97□□□□□ -1.45
CSDE1-218ENST00000610726 PRB4P10163 310 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-218ENST00000610726 AGAP20933 346 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 LMO1P25800 156 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 ZNF585BQ52M93 769 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 TMEM177Q53S58 311 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 KLF17Q5JT82 389 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-218ENST00000610726 VMO1Q7Z5L0 202 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 LHFPL4Q7Z7J7 247 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 TEX45Q8NA69 505 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 OR52E5Q8NH55 327 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 CYTL1Q9NRR1 136 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 WDR83OSQ9Y284 106 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 ID1P41134 155 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 UQCRFS1P47985 274 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 CENPWQ5EE01 88 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 SPANXN1Q5VSR9 72 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 IGF2-ASQ6U949 168 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 RBPMS2Q6ZRY4 209 aaKnown RBP5.97□□□□□ -1.45
CSDE1-218ENST00000610726 SLC25A48Q6ZT89 311 aaKnown RBP5.97□□□□□ -1.45
CSDE1-218ENST00000610726 TNFRSF14Q92956 283 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 BET1LQ9NYM9 111 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 USP9YO00507 2555 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-218ENST00000610726 SCO2A0A1W2PP80 73 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 IGKV3-20P01619 116 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 C5orf42Q9H799 3197 aa5.97□□□□□ -1.45
CSDE1-218ENST00000610726 KIAA1549LQ6ZVL6 1849 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 IGLV3-9A0A075B6K5 115 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 DLX6P56179 175 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 KIAA1644Q3SXP7 199 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 TREML4Q6UXN2 200 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 OR10J6PQ8NGY7 276 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 CLDND2Q8NHS1 167 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 ALPK3Q96L96 1907 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 MED12LQ86YW9 2145 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 EML6Q6ZMW3 1958 aa5.96□□□□□ -1.45
CSDE1-218ENST00000610726 TMEM189A5PLL7 270 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 H0YJW9 148 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 ISLRO14498 428 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 RELQ04864 619 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-218ENST00000610726 PRSS8Q16651 343 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 DUX5Q96PT3 197 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 PRO1933Q9H354 126 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 APCSP02743 223 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 PYYP10082 97 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 GATA4P43694 442 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 RELBQ01201 579 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 COX19Q49B96 90 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 MAPK1IP1LQ8NDC0 245 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 FGF23Q9GZV9 251 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-218ENST00000610726 YAE1D1Q9NRH1 226 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 A0A0C4DFX4 3053 aa5.96□□□□□ -1.46
CSDE1-218ENST00000610726 M0R2Z0 102 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 SLC17A3O00476 420 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 MGPP08493 103 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 OR5AL1P0C617 328 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 GPX4P36969 197 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 RHOGP84095 191 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 MLANAQ16655 118 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 EBLN2Q6P2I7 272 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 PGLYRP4Q96LB8 373 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM131Q92545 1883 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 FOXI3A8MTJ6 420 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 BUB1B-PAK6H3BSN5 160 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 SIAH2O43255 324 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 FGF16O43320 207 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 NDUFS7O75251 213 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 MMP23AO75900 390 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 TPTE2P1Q5T6R2 138 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 SEM1Q6ZVN7 128 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 TEX29Q8N6K0 151 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 IFT22Q9H7X7 185 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 HIVEP2P31629 2446 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 USP9XQ93008 2570 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 C10orf142B7Z368 130 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 EFNB3Q15768 340 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 IQCJQ1A5X6 159 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 TMEM14EPQ6UXP3 125 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 RPP25LQ8N5L8 163 aaKnown RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 C11orf44Q8N8P7 122 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 VAMP8Q9BV40 100 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 SETD2Q9BYW2 2564 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 IGHV3OR16-12A0A075B7B8 117 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 PGPEP1LA6NFU8 196 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 RPL29P47914 159 aaKnown RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 TWIST1Q15672 202 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 HIST1H2BAQ96A08 127 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 SFRP2Q96HF1 295 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 GGTLC1Q9BX51 225 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 GSX1Q9H4S2 264 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-218ENST00000610726 ZNF257Q9Y2Q1 563 aa5.95□□□□□ -1.46
CSDE1-218ENST00000610726 LOC389332A0A1B0GUA5 103 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 FAM90A9PA6NNJ1 464 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 PRSS1P07477 247 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 MAS1LP35410 378 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 MARVELD3Q96A59 401 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 ANAPC10Q9UM13 185 aa5.94□□□□□ -1.46
CSDE1-218ENST00000610726 TNCP24821 2201 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms