RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 TOMM5Q8N4H5 51 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 SLC35G3Q8N808 338 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 RNASE11Q8TAA1 199 aaKnown RBP7.53□□□□□ -1.2
CTSA-215ENST00000607187 DYNLRB2Q8TF09 96 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 CACNG8Q8WXS5 425 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 ASCL2Q99929 193 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 PDCD10Q9BUL8 212 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 SRRQ9GZT4 340 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 PALMDQ9NP74 551 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.53□□□□□ -1.2
CTSA-215ENST00000607187 KCNIP3Q9Y2W7 256 aa7.53□□□□□ -1.2
CTSA-215ENST00000607187 HUWE1Q7Z6Z7 4374 aaKnown RBP7.52□□□□□ -1.2
CTSA-215ENST00000607187 IGHV3-35A0A0C4DH35 117 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 MT-CO2P00403 227 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 C8orf88P0DMB2 117 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 IGHV4-30-4P0DP06 118 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 FCGR2BP31994 310 aaPredicted RBP7.52□□□□□ -1.21
CTSA-215ENST00000607187 ELLP55199 621 aaPredicted RBP7.52□□□□□ -1.21
CTSA-215ENST00000607187 SPCS3P61009 180 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 RAP2BP61225 183 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
CTSA-215ENST00000607187 TMEM187Q14656 261 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 TMEM268Q5VZI3 342 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 GTSCR1Q86UQ5 136 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 SBSPONQ8IVN8 264 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 UXS1Q8NBZ7 420 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 OR52E5Q8NH55 327 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 TMEM190Q8WZ59 177 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 IL22RA2Q969J5 263 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 GPR146Q96CH1 333 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 TXN2Q99757 166 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 CHRDL1Q9BU40 450 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 GAR1Q9NY12 217 aaKnown RBP7.52□□□□□ -1.21
CTSA-215ENST00000607187 NDUFA13Q9P0J0 144 aa7.52□□□□□ -1.21
CTSA-215ENST00000607187 NDUFA4O00483 81 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 CTSGP08311 255 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 RNASE2P10153 161 aaKnown RBP7.51□□□□□ -1.21
CTSA-215ENST00000607187 AKR1C4P17516 323 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 SNCAP37840 140 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 HOXA1P49639 335 aaPredicted RBP7.51□□□□□ -1.21
CTSA-215ENST00000607187 MFAP4P55083 255 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 BSXQ3C1V8 233 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 GAGE13Q4V321 117 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 Q56UQ5 140 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 ZNF57Q68EA5 555 aaPredicted RBP7.51□□□□□ -1.21
CTSA-215ENST00000607187 UBAC2Q8NBM4 344 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 ZNF414Q96IQ9 312 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 ENY2Q9NPA8 101 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 MRPL27Q9P0M9 148 aaKnown RBP7.51□□□□□ -1.21
CTSA-215ENST00000607187 CACNG5Q9UF02 275 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 MLXQ9UH92 298 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 UFC1Q9Y3C8 167 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 U3KQK5 164 aa7.51□□□□□ -1.21
CTSA-215ENST00000607187 A0A0B4J2A0 478 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 K7EMT4 169 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 CORTO00230 105 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 NUPL2O15504 423 aaKnown RBP7.5□□□□□ -1.21
CTSA-215ENST00000607187 IGHV3-48P01763 117 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTSA-215ENST00000607187 RELQ04864 619 aaPredicted RBP7.5□□□□□ -1.21
CTSA-215ENST00000607187 BAK1Q16611 211 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 TMEM128Q5BJH2 165 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 NMSQ5H8A3 153 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 TMED4Q7Z7H5 227 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 TMEM61Q8N0U2 210 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 PINX1Q96BK5 328 aaKnown RBP7.5□□□□□ -1.21
CTSA-215ENST00000607187 SDHCQ99643 169 aaPredicted RBP7.5□□□□□ -1.21
CTSA-215ENST00000607187 SLC25A21Q9BQT8 299 aaPredicted RBP7.5□□□□□ -1.21
CTSA-215ENST00000607187 DAZ1Q9NQZ3 744 aaKnown RBP7.5□□□□□ -1.21
CTSA-215ENST00000607187 CACFD1Q9UGQ2 172 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 SHPKQ9UHJ6 478 aa7.5□□□□□ -1.21
CTSA-215ENST00000607187 C15orf62A8K5M9 175 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 SULT1A3P0DMM9 295 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 SULT1A4P0DMN0 295 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 ANXA3P12429 323 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 CD81P60033 236 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 SRPXP78539 464 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 GUCA2BQ16661 112 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 BTNL8Q6UX41 500 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 LYZL2Q7Z4W2 148 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 LGI3Q8N145 548 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 DUSP18Q8NEJ0 188 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 NEURL2Q9BR09 285 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 C20orf24Q9BUV8 137 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 SELENOKQ9Y6D0 94 aa7.49□□□□□ -1.21
CTSA-215ENST00000607187 IGHV3OR16-8A0A075B7F1 116 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 TRAV25A0A0B4J276 109 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 PIGBOS1A0A0B4J2F0 54 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 NAP1L6A6NFF2 107 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 GNG7O60262 68 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 CD7P09564 240 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 HTR2BP41595 481 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 NPBWR1P48145 328 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 CCR6P51684 374 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 SMCO1Q147U7 214 aa7.48□□□□□ -1.21
CTSA-215ENST00000607187 RBMS2Q15434 407 aaKnown RBP7.48□□□□□ -1.21
CTSA-215ENST00000607187 OR10C1Q96KK4 312 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms