RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 ZNF418Q8TF45 676 aaPredicted RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 TOMM6Q96B49 74 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 C8orf76Q96K31 380 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 SCGB3A1Q96QR1 104 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 OR52E6Q96RD3 313 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 C20orf27Q9GZN8 174 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 TRABDQ9H4I3 376 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 FAM96AQ9H5X1 160 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 UBAP1Q9NZ09 502 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 CKLFQ9UBR5 152 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 CYSLTR1Q9Y271 337 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 LSM5Q9Y4Y9 91 aaKnown RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 TMEM56-RWDD3S4R434 201 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 TENM3Q9P273 2699 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 ZNF469Q96JG9 3925 aaPredicted RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 COL1A1P02452 1464 aaPredicted RBP0.21□□□□□ -2.38
SNORA28-201ENST00000606769 PLB1Q6P1J6 1458 aa0.21□□□□□ -2.38
SNORA28-201ENST00000606769 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 TRAV9-1A0A075B6T8 112 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 IGKV2D-26A0A0A0MRZ7 120 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 TRAV3A0A0B4J244 114 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 TRAV12-1A0A0B4J245 112 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 PQLC2LA1A4F0 135 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 M0R2N4 97 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 PSMD12O00232 456 aaPredicted RBP0.2□□□□□ -2.38
SNORA28-201ENST00000606769 ZNF682O95780 498 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 TNNC2P02585 160 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 TCRBP04435 133 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 COX6A1P12074 109 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 SRIP30626 198 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 SULT1A1P50225 295 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 RAB4BP61018 213 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 PSME3P61289 254 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 C12orf74Q32Q52 190 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 RNASE10Q5GAN6 216 aaKnown RBP0.2□□□□□ -2.38
SNORA28-201ENST00000606769 ANKRD29Q8N6D5 301 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 C3orf56Q8N813 242 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 OR4D11Q8NGI4 311 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 OR13D1Q8NGV5 346 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 PRAP1Q96NZ9 151 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 SERPINI1Q99574 410 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 TMEM147Q9BVK8 224 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 MRPS26Q9BYN8 205 aaKnown RBP0.2□□□□□ -2.38
SNORA28-201ENST00000606769 DCSTAMPQ9H295 470 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 UCK1Q9HA47 277 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 PRTFDC1Q9NRG1 225 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 IDI2-AS1Q9NZ38 188 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 VPS29Q9UBQ0 182 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 ERGIC3Q9Y282 383 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 CCDC144AA2RUR9 1427 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 RIC1Q4ADV7 1423 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 KIF13BQ9NQT8 1826 aa0.2□□□□□ -2.38
SNORA28-201ENST00000606769 CEP192Q8TEP8 1941 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 A0A087WX48 190 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 TRBV6-8A0A0A6YYG3 113 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 A0A0D9SG52 128 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 B4DSR2 109 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 CD79AP11912 226 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 BRS3P32247 399 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 RNASE4P34096 147 aaKnown RBP0.19□□□□□ -2.38
SNORA28-201ENST00000606769 DEFA3P59666 94 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 AESQ08117 197 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 RHEBQ15382 184 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 IAH1Q2TAA2 248 aaPredicted RBP0.19□□□□□ -2.38
SNORA28-201ENST00000606769 DEFB115Q30KQ5 88 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 KHDC3LQ587J8 217 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 SPRNQ5BIV9 151 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 C1orf137Q5JT78 98 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 PTRHD1Q6GMV3 140 aaKnown RBP0.19□□□□□ -2.38
SNORA28-201ENST00000606769 Q8IYB0 196 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 HIST3H2BBQ8N257 126 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 Q8N6K4 173 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 OR8D4Q8NGM9 314 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 OR10J5Q8NHC4 309 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 MCFD2Q8NI22 146 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 DNAJC9Q8WXX5 260 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 ARL5BQ96KC2 179 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 TMEM133Q9H2Q1 129 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 PARVGQ9HBI0 331 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 C14orf105Q9NVL8 296 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 OR5AC2Q9NZP5 309 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 LAMA4Q16363 1823 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 PIK3C2GO75747 1445 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 LAMB4A4D0S4 1761 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 MED1Q15648 1581 aaPredicted RBP0.19□□□□□ -2.38
SNORA28-201ENST00000606769 PLXND1Q9Y4D7 1925 aa0.19□□□□□ -2.38
SNORA28-201ENST00000606769 ARHGEF28Q8N1W1 1705 aaKnown RBP0.18□□□□□ -2.38
SNORA28-201ENST00000606769 SBF1O95248 1867 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 E9PCH4 1651 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 EML6Q6ZMW3 1958 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 TNRC6AQ8NDV7 1962 aaKnown RBP0.18□□□□□ -2.38
SNORA28-201ENST00000606769 TRBV6-7A0A0A0MS04 114 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 hADV38S2A0JD32 116 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 PHGR1C9JFL3 82 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 M0R036 132 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 INE1O15225 51 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 UBL3O95164 117 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 TCL1BO95988 128 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 IFNA10P01566 189 aa0.18□□□□□ -2.38
SNORA28-201ENST00000606769 RPS17P08708 135 aaKnown RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms