RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 CLDND2Q8NHS1 167 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 ZBTB45Q96K62 511 aaPredicted RBP4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 LINC00479Q96M42 142 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 OR8B2Q96RD0 313 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 TMEM147Q9BVK8 224 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 RNF7Q9UBF6 113 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 VSIG4Q9Y279 399 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 DNAJC15Q9Y5T4 150 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 TJP1Q07157 1748 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 NWD2Q9ULI1 1742 aa4.69□□□□□ -1.66
LSM1P2-201ENST00000604911 COL14A1Q05707 1796 aaKnown RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TRAV27A0A087WT01 109 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TRAV13-1A0A0B4J241 112 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TRBV7-7A0A0K0K1E9 115 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 FAM240AA0A1B0GVK7 77 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 FCN1O00602 326 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 BUB3O43684 328 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 FGF1P05230 155 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 FGF6P10767 208 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 CBLN1P23435 193 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 GATA2P23769 480 aaPredicted RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 HLA-DMBP28068 263 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 UBE2G1P62253 170 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 SNRPFP62306 86 aaKnown RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 RPL18AQ02543 176 aaKnown RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 POU3F1Q03052 451 aaPredicted RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 KLF5Q13887 457 aaPredicted RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 ZNF324BQ6AW86 544 aaPredicted RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 Q6ZRU5 148 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TEN1Q86WV5 123 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TMEM99Q8N816 258 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 MYOZ3Q8TDC0 251 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 CARD19Q96LW7 228 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 RPP25Q9BUL9 199 aaKnown RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 EMC6Q9BV81 110 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 RTL8AQ9BWD3 113 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 PRRG4Q9BZD6 226 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 ZNF331Q9NQX6 463 aaPredicted RBP4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TP53TG3Q9ULZ0 132 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 DSPPQ9NZW4 1301 aa4.68□□□□□ -1.66
LSM1P2-201ENST00000604911 TSC2P49815 1807 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 A8MT66 165 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 OOSP1A8MZH6 123 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 EPM2AB3EWF7 344 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 NUDT14O95848 222 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 PYYP10082 97 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 COX7CP15954 63 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 MDKP21741 143 aaPredicted RBP4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 IL3RAP26951 378 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 MPV17P39210 176 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 SP4Q02446 784 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 ARFRP1Q13795 201 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 RNASE12Q5GAN4 147 aaKnown RBP4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 STPG1Q5TH74 334 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 IGFL2Q6UWQ7 119 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 Q71RC1 249 aaPredicted RBP4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 C9orf106Q8NAJ2 232 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 ZNF501Q96CX3 271 aaPredicted RBP4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 FMC1Q96HJ9 113 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 C2orf50Q96LR7 162 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 OR2A5Q96R48 311 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 CLEC7AQ9BXN2 247 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 PLA2G2FQ9BZM2 168 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 AGPAT4-IT1Q9H0P7 198 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 NEUROG3Q9Y4Z2 214 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 KAT6AQ92794 2004 aa4.67□□□□□ -1.66
LSM1P2-201ENST00000604911 DEPDC5O75140 1603 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 TRAV12-2A0A075B6T6 113 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 A0A0J9YW62 118 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 FAM24AA6NFZ4 105 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 LYRM9A8MSI8 78 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 HCRTO43612 131 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 SSSCA1O60232 199 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 LYZL6O75951 148 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 RBP4P02753 201 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 CD3DP04234 171 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 FKBP2P26885 142 aaKnown RBP4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 FBXW4P57775 412 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 MTPNP58546 118 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 PIANPQ8IYJ0 282 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 LRTM2Q8N967 370 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 C15orf53Q8NAA6 179 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 ZNF114Q8NC26 417 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 FAM213BQ8TBF2 198 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 BORCS8Q96FH0 119 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 KXD1Q9BQD3 176 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 GNB1LQ9BYB4 327 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 PDFQ9HBH1 243 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 STARD5Q9NSY2 213 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 PILRAQ9UKJ1 303 aa4.66□□□□□ -1.66
LSM1P2-201ENST00000604911 ARFGEF2Q9Y6D5 1785 aa4.65□□□□□ -1.66
LSM1P2-201ENST00000604911 SRCAPQ6ZRS2 3230 aa4.65□□□□□ -1.66
LSM1P2-201ENST00000604911 LRP6O75581 1613 aa4.65□□□□□ -1.66
LSM1P2-201ENST00000604911 TMEM131Q92545 1883 aa4.65□□□□□ -1.66
LSM1P2-201ENST00000604911 RREB1Q92766 1687 aa4.65□□□□□ -1.66
LSM1P2-201ENST00000604911 TRBV19A0A075B6N1 114 aa4.65□□□□□ -1.67
LSM1P2-201ENST00000604911 A0A1W2PS18 150 aa4.65□□□□□ -1.67
LSM1P2-201ENST00000604911 GRIFINA4D1Z8 144 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms