RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 A0A1B0GXF2 115 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 PEX7O00628 323 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 GOSR1O95249 250 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 MAGEA5P43359 124 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 LYSMD4Q5XG99 296 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 C2orf91Q6ZV80 131 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 SLC25A2Q9BXI2 301 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 C1RLQ9NZP8 487 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 BOKQ9UMX3 212 aaPredicted RBP10.14□□□□□ -0.79
CDCA3-212ENST00000604599 KLF13Q9Y2Y9 288 aaPredicted RBP10.14□□□□□ -0.79
CDCA3-212ENST00000604599 HLA-DRB1P01911 266 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 HIST1H1EP10412 219 aaKnown RBP10.14□□□□□ -0.79
CDCA3-212ENST00000604599 HTR1DP28221 377 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 IL11RAQ14626 422 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 SMIM21Q3B7S5 101 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 HES3Q5TGS1 186 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 LINC00696Q6ZRV3 163 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 OR4S2Q8NH73 311 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 JMJD8Q96S16 334 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 IFI27L2Q9H2X8 130 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 TMEM14BQ9NUH8 114 aa10.14□□□□□ -0.79
CDCA3-212ENST00000604599 DSPP15924 2871 aaKnown RBP10.14□□□□□ -0.79
CDCA3-212ENST00000604599 CSN3P07498 182 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 ARF6P62330 175 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 PAX2Q02962 417 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 WDR82Q6UXN9 313 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 TMEM251Q8N6I4 163 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 NANOS1Q8WY41 292 aaKnown RBP10.13□□□□□ -0.79
CDCA3-212ENST00000604599 FAM167A-AS1Q96KT0 104 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 FZR1Q9UM11 496 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 REG1BP48304 166 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 TCTAP57738 103 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 PPP1R32Q7Z5V6 425 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 BPIFA4PQ86YQ2 179 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 CD177Q8N6Q3 437 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 CHCHD1Q96BP2 118 aaKnown RBP10.13□□□□□ -0.79
CDCA3-212ENST00000604599 PGLYRP4Q96LB8 373 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 AP1S3Q96PC3 154 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 FOXA2Q9Y261 457 aaPredicted RBP10.13□□□□□ -0.79
CDCA3-212ENST00000604599 OR51B2Q9Y5P1 312 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 TMEM265A0A087WTH1 108 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 G3V4G9 280 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 H3BUT2 72 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 TNFSF15O95150 251 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 FAM162BQ5T6X4 162 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 ATP5L2Q7Z4Y8 100 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 H1FXQ92522 213 aaKnown RBP10.13□□□□□ -0.79
CDCA3-212ENST00000604599 DUSP23Q9BVJ7 150 aa10.13□□□□□ -0.79
CDCA3-212ENST00000604599 HEATR1Q9H583 2144 aaKnown RBP10.12□□□□□ -0.79
CDCA3-212ENST00000604599 DMDP11532 3685 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 NAV3Q8IVL0 2385 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 IQCF6A8MYZ5 107 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 LIPFP07098 398 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 UFSP1Q6NVU6 142 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 ZNF329Q86UD4 541 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 TEX45Q8NA69 505 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 C5orf17Q8NAS9 161 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 OR1N2Q8NGR9 330 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 HILPDAQ9Y5L2 63 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 PLAUP00749 431 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 VWA1Q6PCB0 445 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 GTF2H5Q6ZYL4 71 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 FAM90A1Q86YD7 464 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 KLF14Q8TD94 323 aaPredicted RBP10.12□□□□□ -0.79
CDCA3-212ENST00000604599 DDB2Q92466 427 aa10.12□□□□□ -0.79
CDCA3-212ENST00000604599 COX8AP10176 69 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 MRPL49Q13405 166 aaKnown RBP10.11□□□□□ -0.79
CDCA3-212ENST00000604599 PET117Q6UWS5 81 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 LINC00322Q6ZN03 302 aaPredicted RBP10.11□□□□□ -0.79
CDCA3-212ENST00000604599 PRR7Q8TB68 274 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 MS4A6AQ9H2W1 248 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 C7orf69Q9H7B7 122 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 JPT1Q9UK76 154 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 LRRC29Q8WV35 223 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 GTSF1Q8WW33 167 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 PAXXQ9BUH6 204 aa10.11□□□□□ -0.79
CDCA3-212ENST00000604599 IGHV3-48P01763 117 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 SSBP2P81877 361 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-212ENST00000604599 RAB37Q96AX2 223 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-212ENST00000604599 FNDC10F2Z333 226 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 SP9P0CG40 484 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 SAA2P0DJI9 122 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-212ENST00000604599 LOXL3P58215 753 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 SEC11AP67812 179 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 TMEM116Q8NCL8 245 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 TMUB1Q9BVT8 246 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 C19orf24Q9BVV8 132 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 B4GALT7Q9UBV7 327 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 SVILO95425 2214 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 BHLHA15Q7RTS1 189 aaPredicted RBP10.1□□□□□ -0.79
CDCA3-212ENST00000604599 OR10W1Q8NGF6 305 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 BLNKQ8WV28 456 aa10.1□□□□□ -0.79
CDCA3-212ENST00000604599 MRPL32Q9BYC8 188 aaKnown RBP10.1□□□□□ -0.79
CDCA3-212ENST00000604599 RPP21Q9H633 154 aaKnown RBP10.1□□□□□ -0.79
CDCA3-212ENST00000604599 CHEK1O14757 476 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms