RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 IMUPQ9GZP8 106 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 TMEM222Q9H0R3 208 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 TRPM6Q9BX84 2022 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 DKK1O94907 266 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 FRMD6-AS1P0C7T7 363 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 COX5AP20674 150 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 CSN1S1P47710 185 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 TMEM258P61165 79 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 RTL8BQ17RB0 113 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 LGALS9BQ3B8N2 356 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 KLF17Q5JT82 389 aaPredicted RBP7.25□□□□□ -1.25
COMMD3-215ENST00000602574 LGALS9CQ6DKI2 356 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 TREML4Q6UXN2 200 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 ATP5L2Q7Z4Y8 100 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 APRG1Q8IVJ8 170 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 BCL6BQ8N143 479 aaPredicted RBP7.25□□□□□ -1.25
COMMD3-215ENST00000602574 ZNF740Q8NDX6 193 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 ELSPBP1Q96BH3 223 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 LSM7Q9UK45 103 aaKnown RBP7.25□□□□□ -1.25
COMMD3-215ENST00000602574 RAXQ9Y2V3 346 aa7.25□□□□□ -1.25
COMMD3-215ENST00000602574 TCRBV4S1A1TA0A5B7 111 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 FRG2CA6NGY1 282 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 ADM5C9JUS6 153 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 PDCD6O75340 191 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 CRYGAP11844 174 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 PPP1CAP62136 330 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 SLC38A11Q08AI6 406 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 SP6Q3SY56 376 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 HRCT1Q6UXD1 115 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 LINC00336Q6ZUF6 198 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 CEND1Q8N111 149 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 LINC01600Q96MT4 127 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 AP5S1Q9NUS5 200 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 A0A0A6YYD5 115 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 A8MZ25 164 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 ACTL6BO94805 426 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 NCR2O95944 276 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 HMGN2P05204 90 aaKnown RBP7.24□□□□□ -1.25
COMMD3-215ENST00000602574 RPL35AP18077 110 aaKnown RBP7.24□□□□□ -1.25
COMMD3-215ENST00000602574 RPL30P62888 115 aaKnown RBP7.24□□□□□ -1.25
COMMD3-215ENST00000602574 C22orf39Q6P5X5 142 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 TMEFF1Q8IYR6 380 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 GATAD1Q8WUU5 269 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 IGFBPL1Q8WX77 278 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 JPT2Q9H910 190 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 SLC25A22Q9H936 323 aa7.24□□□□□ -1.25
COMMD3-215ENST00000602574 LINC01619G3V211 115 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 BGLAPP02818 100 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 HMGN2P46Q86SG4 172 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 RAB42Q8N4Z0 105 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 C1orf147Q96MC9 270 aaPredicted RBP7.23□□□□□ -1.25
COMMD3-215ENST00000602574 TMEM147Q9BVK8 224 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 B9D1Q9UPM9 204 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 TP53TG1Q9Y2A0 90 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 EXPH5Q8NEV8 1989 aa7.23□□□□□ -1.25
COMMD3-215ENST00000602574 KLK10O43240 276 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 SRSF10O75494 262 aaKnown RBP7.22□□□□□ -1.25
COMMD3-215ENST00000602574 ASAH2BP0C7U1 165 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 NCBP2P52298 156 aaKnown RBP eCLIP7.22□□□□□ -1.25
COMMD3-215ENST00000602574 KCTD18Q6PI47 426 aaPredicted RBP7.22□□□□□ -1.25
COMMD3-215ENST00000602574 LINC00114Q6XXX2 140 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 SSX8Q7RTT4 187 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 ZNF808Q8N4W9 903 aaPredicted RBP7.22□□□□□ -1.25
COMMD3-215ENST00000602574 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 ARHGAP5-AS1Q96IT6 56 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 COL4A2P08572 1712 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 C3orf85A0A1B0GTC6 90 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 TM4SF5O14894 197 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 CD52P31358 61 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 FAM53BQ14153 422 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 C12orf74Q32Q52 190 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 FGF14Q92915 247 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 TIMD4Q96H15 378 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 ZNF488Q96MN9 340 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 R4GMQ9 66 aa7.22□□□□□ -1.25
COMMD3-215ENST00000602574 NCOA6Q14686 2063 aaPredicted RBP7.22□□□□□ -1.25
COMMD3-215ENST00000602574 DOCK11Q5JSL3 2073 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 C17orf51A8MQB3 221 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 A8MWV9 139 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 RRHO14718 337 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 VWC2Q2TAL6 325 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 C1orf195Q5TG92 126 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 Q6ZT83 130 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 LINC00173Q6ZV60 143 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 DPH3Q96FX2 82 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 CHAC1Q9BUX1 264 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 LIME1Q9H400 295 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 NHP2Q9NX24 153 aaKnown RBP7.21□□□□□ -1.25
COMMD3-215ENST00000602574 HCFC1P51610 2035 aa7.21□□□□□ -1.25
COMMD3-215ENST00000602574 TMED7-TICAM2A0A0A6YYA0 188 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 A8MWL6 223 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 OOSP1A8MZH6 123 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 BCL3P20749 454 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 EBI3Q14213 229 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 MRPL2Q5T653 305 aaKnown RBP7.21□□□□□ -1.26
COMMD3-215ENST00000602574 GOLT1AQ6ZVE7 132 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 ZNF295-AS1Q8N0V1 137 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 GJC3Q8NFK1 279 aa7.21□□□□□ -1.26
COMMD3-215ENST00000602574 CYB5D2Q8WUJ1 264 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms