RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 NBDYA0A0U1RRE5 68 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 MEIS3P1A6NDR6 274 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 IGKV1-39P01597 117 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 IGKV1D-39P04432 117 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 FXYD7P58549 80 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 HERV-K104P61576 105 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 SEC22AQ96IW7 307 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 U3KQE9 123 aa11.3□□□□□ -0.6
SSBP4-211ENST00000601614 IGHV3OR16-12A0A075B7B8 117 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 DEFB1P60022 68 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 KRTAP10-2P60368 255 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 MLANAQ16655 118 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 TSPAN14Q8NG11 270 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 ZNRF2Q8NHG8 242 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 GLMPQ8WWB7 406 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 TSC22D3Q99576 134 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 FXYD6Q9H0Q3 95 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
SSBP4-211ENST00000601614 RNF167Q9H6Y7 350 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 FAT1Q14517 4588 aa11.29□□□□□ -0.6
SSBP4-211ENST00000601614 TMEM189A5PLL7 270 aa11.28□□□□□ -0.6
SSBP4-211ENST00000601614 FAM90A26D6RGX4 464 aa11.28□□□□□ -0.6
SSBP4-211ENST00000601614 RFX2P48378 723 aa11.28□□□□□ -0.6
SSBP4-211ENST00000601614 HSPE1P61604 102 aaKnown RBP11.28□□□□□ -0.6
SSBP4-211ENST00000601614 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
SSBP4-211ENST00000601614 TBCEQ15813 527 aaPredicted RBP11.28□□□□□ -0.6
SSBP4-211ENST00000601614 IZUMO4Q1ZYL8 232 aa11.28□□□□□ -0.6
SSBP4-211ENST00000601614 ZNF2Q9BSG1 426 aaPredicted RBP11.28□□□□□ -0.6
SSBP4-211ENST00000601614 AUNIPQ9H7T9 357 aa11.28□□□□□ -0.6
SSBP4-211ENST00000601614 EHFQ9NZC4 300 aa11.28□□□□□ -0.6
SSBP4-211ENST00000601614 SMIM9A6NGZ8 99 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 IGKV1-17P01599 117 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
SSBP4-211ENST00000601614 ERHP84090 104 aaKnown RBP11.27□□□□□ -0.61
SSBP4-211ENST00000601614 OXA1LQ15070 435 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 SFXN4Q6P4A7 337 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 C16orf54Q6UWD8 224 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 DHRS11Q6UWP2 260 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 BORCS5Q969J3 196 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 RRP15Q9Y3B9 282 aaKnown RBP11.27□□□□□ -0.61
SSBP4-211ENST00000601614 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 RFNGQ9Y644 331 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
SSBP4-211ENST00000601614 CLN5O75503 358 aa11.26□□□□□ -0.61
SSBP4-211ENST00000601614 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
SSBP4-211ENST00000601614 TIGITQ495A1 244 aa11.26□□□□□ -0.61
SSBP4-211ENST00000601614 KCTD21Q4G0X4 260 aa11.26□□□□□ -0.61
SSBP4-211ENST00000601614 PHLDA2Q53GA4 152 aa11.26□□□□□ -0.61
SSBP4-211ENST00000601614 TXNL4BQ9NX01 149 aaKnown RBP11.26□□□□□ -0.61
SSBP4-211ENST00000601614 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
SSBP4-211ENST00000601614 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 GPR31O00270 319 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
SSBP4-211ENST00000601614 H2BFWTQ7Z2G1 175 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 ZNF709Q8N972 641 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 TMEM230Q96A57 120 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 ATG101Q9BSB4 218 aa11.25□□□□□ -0.61
SSBP4-211ENST00000601614 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
SSBP4-211ENST00000601614 MYCBP2O75592 4640 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 PMP2P02689 132 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 CLEC2LP0C7M8 214 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 AQP4P55087 323 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 CMTM1Q8IZ96 169 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 C15orf53Q8NAA6 179 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 OR4X1Q8NH49 305 aa11.24□□□□□ -0.61
SSBP4-211ENST00000601614 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
SSBP4-211ENST00000601614 C1orf158Q8N1D5 194 aa11.23□□□□□ -0.61
SSBP4-211ENST00000601614 NARS2Q96I59 477 aaKnown RBP11.23□□□□□ -0.61
SSBP4-211ENST00000601614 KRTAP1-5Q9BYS1 174 aa11.23□□□□□ -0.61
SSBP4-211ENST00000601614 NRN1Q9NPD7 142 aa11.23□□□□□ -0.61
SSBP4-211ENST00000601614 ANAPC10Q9UM13 185 aa11.23□□□□□ -0.61
SSBP4-211ENST00000601614 LOC102723971A0A1B0GUV8 181 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 HNRNPCP07910 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
SSBP4-211ENST00000601614 SNCAP37840 140 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 OPRK1P41145 380 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 CBX5P45973 191 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 EIF2B2P49770 351 aaKnown RBP11.22□□□□□ -0.61
SSBP4-211ENST00000601614 DAD1P61803 113 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 USF2Q15853 346 aaPredicted RBP11.22□□□□□ -0.61
SSBP4-211ENST00000601614 GSG1LQ6UXU4 331 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 TBC1D26Q86UD7 250 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 SLC35B3Q9H1N7 401 aa11.22□□□□□ -0.61
SSBP4-211ENST00000601614 SEPSECSQ9HD40 501 aaKnown RBP11.22□□□□□ -0.61
SSBP4-211ENST00000601614 FAM212BQ9NTI7 297 aaPredicted RBP11.22□□□□□ -0.61
SSBP4-211ENST00000601614 A0A0A6YYH2 397 aa11.21□□□□□ -0.61
SSBP4-211ENST00000601614 A6NJ64 397 aa11.21□□□□□ -0.61
SSBP4-211ENST00000601614 SDC2P34741 201 aa11.21□□□□□ -0.61
SSBP4-211ENST00000601614 NKX2-1P43699 371 aaPredicted RBP11.21□□□□□ -0.61
SSBP4-211ENST00000601614 AP2S1P53680 142 aaPredicted RBP11.21□□□□□ -0.61
SSBP4-211ENST00000601614 MXD1Q05195 221 aa11.21□□□□□ -0.61
SSBP4-211ENST00000601614 VCXQ9H320 206 aa11.21□□□□□ -0.61
SSBP4-211ENST00000601614 IFT46Q9NQC8 304 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms