RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PSMG3Q9BT73 122 aaPredicted RBP17.7■□□□□ 0.42
IRF3-228ENST00000601291 KLK9Q9UKQ9 250 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 TIMM9Q9Y5J7 89 aa17.7■□□□□ 0.42
IRF3-228ENST00000601291 RNASE1P07998 156 aaKnown RBP17.69■□□□□ 0.42
IRF3-228ENST00000601291 RND2P52198 227 aa17.69■□□□□ 0.42
IRF3-228ENST00000601291 RPL15P61313 204 aaKnown RBP17.69■□□□□ 0.42
IRF3-228ENST00000601291 OR2G3Q8NGZ4 309 aa17.69■□□□□ 0.42
IRF3-228ENST00000601291 RSG1Q9BU20 258 aa17.69■□□□□ 0.42
IRF3-228ENST00000601291 LSM4Q9Y4Z0 139 aaKnown RBP17.69■□□□□ 0.42
IRF3-228ENST00000601291 SONP18583 2426 aaKnown RBP17.68■□□□□ 0.42
IRF3-228ENST00000601291 IGHV3-21A0A0B4J1V1 117 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 FAM181BA6NEQ2 426 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 H3BUA1 57 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 K7EIM0 57 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 OR2J3O76001 311 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 IGHV3-48P01763 117 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 TMEM95Q3KNT9 176 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 ACSM6Q6P461 480 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 Q8N2B8 174 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 NPIPB3Q92617 1050 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 KCNIP2Q9NS61 270 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 FBXL7Q9UJT9 491 aa17.68■□□□□ 0.42
IRF3-228ENST00000601291 SOX15O60248 233 aa17.67■□□□□ 0.42
IRF3-228ENST00000601291 PPIFP30405 207 aaKnown RBP17.67■□□□□ 0.42
IRF3-228ENST00000601291 CAMLGP49069 296 aa17.67■□□□□ 0.42
IRF3-228ENST00000601291 NECAP1Q8NC96 275 aa17.67■□□□□ 0.42
IRF3-228ENST00000601291 TMEM116Q8NCL8 245 aa17.67■□□□□ 0.42
IRF3-228ENST00000601291 MGST2Q99735 147 aa17.67■□□□□ 0.42
IRF3-228ENST00000601291 TRBV9A0A0B4J1U6 114 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 CRLF1O75462 422 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 CRYBA1P05813 215 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 RHOGP84095 191 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 FAM74A1Q5RGS3 127 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 ZFHX3Q15911 3703 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 AGPAT2O15120 278 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 NDUFB8O95169 186 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 BRI3O95415 125 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 SERF2P84101 59 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 TMEM182Q6ZP80 229 aaPredicted RBP17.66■□□□□ 0.42
IRF3-228ENST00000601291 CENPVQ7Z7K6 275 aaPredicted RBP17.66■□□□□ 0.42
IRF3-228ENST00000601291 OR4X1Q8NH49 305 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 VN1R17PQ8TDU5 208 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 RNF141Q8WVD5 230 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 MS4A10Q96PG2 267 aa17.66■□□□□ 0.42
IRF3-228ENST00000601291 MRPL36Q9P0J6 103 aaKnown RBP17.66■□□□□ 0.42
IRF3-228ENST00000601291 ANK3Q12955 4377 aaKnown RBP17.65■□□□□ 0.42
IRF3-228ENST00000601291 MXRA5Q9NR99 2828 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 FAM223BA6NKX1 122 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 ZFP92A6NM28 416 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 RAB14P61106 215 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 CFHR3Q02985 330 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 FAM223AQ8IWN6 122 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 THAP8Q8NA92 274 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 CXorf58Q96LI9 332 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 GGTLC1Q9BX51 225 aa17.65■□□□□ 0.42
IRF3-228ENST00000601291 UMAD1C9J7I0 102 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 NPBWR1P48145 328 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 MFAP4P55083 255 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 SLC35B1P78383 322 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 C15orf32Q32M92 178 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 AKR1C8PQ5T2L2 129 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 LRRC20Q8TCA0 184 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 C21orf62Q9NYP8 219 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 RFNGQ9Y644 331 aa17.64■□□□□ 0.41
IRF3-228ENST00000601291 IGKV1OR2-108A0A075B7D4 117 aa17.63■□□□□ 0.41
IRF3-228ENST00000601291 TRGV3P03979 118 aa17.63■□□□□ 0.41
IRF3-228ENST00000601291 OR10J1P30954 320 aa17.63■□□□□ 0.41
IRF3-228ENST00000601291 SULT1A2P50226 295 aa17.63■□□□□ 0.41
IRF3-228ENST00000601291 RAB5CP51148 216 aa17.63■□□□□ 0.41
IRF3-228ENST00000601291 DEFA5Q01523 94 aa17.63■□□□□ 0.41
IRF3-228ENST00000601291 MFSD2BA6NFX1 497 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 CLN5O75503 358 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 SCGB2A1O75556 95 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 IGLV1-40P01703 118 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 PF4V1P10720 104 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TPPP2P59282 170 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TCRBV4S1A1TA0A5B7 111 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TMEM89A2RUT3 159 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TCF21O43680 179 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 IGHG4P01861 327 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 RPL29P47914 159 aaKnown RBP17.62■□□□□ 0.41
IRF3-228ENST00000601291 ELLP55199 621 aaPredicted RBP17.62■□□□□ 0.41
IRF3-228ENST00000601291 ATP5G2Q06055 141 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 Q56UQ5 140 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 Q6ZSV7 163 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 EEF1AKMT3Q96AZ1 226 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TRGV9Q99603 122 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TXN2Q99757 166 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 PXMP4Q9Y6I8 212 aa17.62■□□□□ 0.41
IRF3-228ENST00000601291 TRAV30A0A087WSZ9 112 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 PSMB11A5LHX3 300 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 GNG7O60262 68 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 TSPAN15O95858 294 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 MBP02144 154 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 FFAR4Q5NUL3 377 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 CYP2G1PQ6ZSU1 146 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 S4R3C0 116 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 HIVEP1P15822 2718 aa17.61■□□□□ 0.41
IRF3-228ENST00000601291 IGKV1D-37A0A075B6S9 117 aa17.6■□□□□ 0.41
IRF3-228ENST00000601291 FCGR2BP31994 310 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms