RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TSC22D3Q99576 134 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 FXYD6Q9H0Q3 95 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 DIABLOQ9NR28 239 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 BATF3Q9NR55 127 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 EHFQ9NZC4 300 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 RABAC1Q9UI14 185 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 TBC1D24Q9ULP9 559 aa4.36□□□□□ -1.71
VRK3-220ENST00000600259 HERC1Q15751 4861 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 A0A0B4J293 547 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 H3BMM0 161 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 CLN5O75503 358 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 IGKV1-5P01602 117 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 PMP2P02689 132 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 RNASE2P10153 161 aaKnown RBP4.35□□□□□ -1.71
VRK3-220ENST00000600259 NPPCP23582 126 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 P2RY1P47900 373 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 NPBWR1P48145 328 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 RPL11P62913 178 aaKnown RBP4.35□□□□□ -1.71
VRK3-220ENST00000600259 ERHP84090 104 aaKnown RBP4.35□□□□□ -1.71
VRK3-220ENST00000600259 PHLDA2Q53GA4 152 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 ACTL10Q5JWF8 245 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 IDNKQ5T6J7 187 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 C16orf54Q6UWD8 224 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 ZNF705AQ6ZN79 300 aaPredicted RBP4.35□□□□□ -1.71
VRK3-220ENST00000600259 Q6ZRM9 215 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 GLMPQ8WWB7 406 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 PINX1Q96BK5 328 aaKnown RBP4.35□□□□□ -1.71
VRK3-220ENST00000600259 NEU1Q99519 415 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 NDUFAF3Q9BU61 184 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 SSR3Q9UNL2 185 aa4.35□□□□□ -1.71
VRK3-220ENST00000600259 IGLV2-18A0A075B6J9 118 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 A0A1W2PS18 150 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 ZNF705FA8MVS1 300 aaPredicted RBP4.34□□□□□ -1.71
VRK3-220ENST00000600259 EIF4EP06730 217 aaKnown RBP4.34□□□□□ -1.71
VRK3-220ENST00000600259 ZNF705DP0CH99 300 aaPredicted RBP4.34□□□□□ -1.71
VRK3-220ENST00000600259 ZNF705BP0CI00 300 aaPredicted RBP4.34□□□□□ -1.71
VRK3-220ENST00000600259 PSMB9P28065 219 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 RPL5P46777 297 aaKnown RBP4.34□□□□□ -1.71
VRK3-220ENST00000600259 UCP3P55916 312 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 GABARAPL2P60520 117 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 BSXQ3C1V8 233 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 RNF212Q495C1 297 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 SPINK9Q5DT21 86 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 H2BFWTQ7Z2G1 175 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 TBC1D26Q86UD7 250 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 CMTM1Q8IZ96 169 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 STXBP6Q8NFX7 210 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 OR6F1Q8NGZ6 308 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 OR4X1Q8NH49 305 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 OR4A16Q8NH70 328 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 GPX8Q8TED1 209 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 MRGPRFQ96AM1 343 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 FAM210BQ96KR6 192 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 CNBD2Q96M20 576 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 TMEM231Q9H6L2 316 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 SEPSECSQ9HD40 501 aaKnown RBP4.34□□□□□ -1.71
VRK3-220ENST00000600259 XCL2Q9UBD3 114 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 BLOC1S6Q9UL45 172 aa4.34□□□□□ -1.71
VRK3-220ENST00000600259 A0A0G2JRQ6 117 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 TMEM127O75204 238 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 CDK2AP2O75956 126 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 NXPH3O95157 252 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 ATP6V1G2O95670 118 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 IFNA10P01566 189 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 NPY1RP25929 384 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 HLA-DMAP28067 261 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 HRH1P35367 487 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 ETV6P41212 452 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 TAS2R46P59540 309 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 TAS2R20P59543 309 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 TNP2Q05952 138 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 TIGITQ495A1 244 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 KCTD21Q4G0X4 260 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 AARDQ4LEZ3 155 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 PSMG4Q5JS54 123 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 LPCAT3Q6P1A2 487 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 IZUMO2Q6UXV1 221 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 TSPAN14Q8NG11 270 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 OR5H2Q8NGV7 314 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 S100A16Q96FQ6 103 aaKnown RBP4.33□□□□□ -1.72
VRK3-220ENST00000600259 METTL26Q96S19 204 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
VRK3-220ENST00000600259 HELTA6NFD8 242 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 SMIM9A6NGZ8 99 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 BUB3O43684 328 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 IFNA21P01568 189 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 IFNA17P01571 189 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 SPART-AS1P0CW21 52 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 HLA-DRB4P13762 266 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 PRSS3P35030 304 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 TGFBR1P36897 503 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 SNCAP37840 140 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 RPS19P39019 145 aaKnown RBP4.32□□□□□ -1.72
VRK3-220ENST00000600259 DEFB1P60022 68 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 YPEL3P61236 119 aaPredicted RBP4.32□□□□□ -1.72
VRK3-220ENST00000600259 RND3P61587 244 aa4.32□□□□□ -1.72
VRK3-220ENST00000600259 DHODHQ02127 395 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms