RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 SLC25A24Q6NUK1 477 aa9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 FAM223AQ8IWN6 122 aa9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 PRR25Q96S07 402 aa9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 HIPK2Q9H2X6 1198 aa9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 PSENENQ9NZ42 101 aa9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 MBD2Q9UBB5 411 aa9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 LSM4Q9Y4Z0 139 aaKnown RBP9.83□□□□□ -0.84
SH2D3A-208ENST00000599563 MFSD2BA6NFX1 497 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 FAM24AA6NFZ4 105 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 PMS2P5A8MQ11 134 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 IFNA10P01566 189 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 IGHV3-23P01764 117 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 DEFA4P12838 97 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 RHOGP84095 191 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 CYCSP99999 105 aaKnown RBP9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 MLANAQ16655 118 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 C2orf83Q53S99 150 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 ZNF343Q6P1L6 599 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 HAPLN4Q86UW8 402 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 NECAP1Q8NC96 275 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 OR1P1Q8NH06 330 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 MISP3Q96FF7 219 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 ST6GAL2Q96JF0 529 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 SMIM8Q96KF7 97 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 RNF126Q9BV68 326 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 FNDC4Q9H6D8 234 aaPredicted RBP9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 KLK9Q9UKQ9 250 aa9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 PAIP2BQ9ULR5 123 aaKnown RBP9.82□□□□□ -0.84
SH2D3A-208ENST00000599563 IGSF23A1L1A6 192 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 PRSS46E5RG02 174 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 K7EIM0 57 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 L7N2F9 121 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 SNCAP37840 140 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 HTR2BP41595 481 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 RAP2BP61225 183 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 VAMP2P63027 116 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 PRSS54Q6PEW0 395 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 OR2T35Q8NGX2 323 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 PINX1Q96BK5 328 aaKnown RBP9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 CIB3Q96Q77 187 aaPredicted RBP9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 RAB40CQ96S21 281 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 MRPL36Q9P0J6 103 aaKnown RBP9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 CACFD1Q9UGQ2 172 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 FBXL7Q9UJT9 491 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 SMAD5-AS1Q9Y6J3 95 aa9.81□□□□□ -0.84
SH2D3A-208ENST00000599563 I3L2K1 104 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 MT-CO2P00403 227 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 METTL15P1P0C7V9 234 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 ARL16Q0P5N6 197 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 EXOSC2Q13868 293 aaKnown RBP9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 RPEL1Q2QD12 228 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 BSCL2Q96G97 398 aaPredicted RBP9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 U3KQ87 197 aa9.8□□□□□ -0.84
SH2D3A-208ENST00000599563 ANKRD34BA5PLL1 514 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 TSC22D2O75157 780 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 LYL1P12980 280 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 HIST1H1BP16401 226 aaKnown RBP9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 KLF5Q13887 457 aaPredicted RBP9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 C15orf32Q32M92 178 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 CCDC140Q96MF4 163 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 LYRM2Q9NU23 88 aaPredicted RBP9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 PEMTQ9UBM1 199 aa9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 STRAPQ9Y3F4 350 aaKnown RBP9.79□□□□□ -0.84
SH2D3A-208ENST00000599563 TENM3Q9P273 2699 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 E5RGE8 158 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 CYB5BO43169 146 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 IGLV1-51P01701 117 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 GP9P14770 177 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 PVALBP20472 110 aaPredicted RBP9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 OPRK1P41145 380 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 CAV2P51636 162 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 TAS2R30P59541 319 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 OR8G2PQ6IF36 304 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 TMEM252Q8N6L7 170 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 OR11H4Q8NGC9 324 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 OR9G4Q8NGQ1 327 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 SCARB1Q8WTV0 552 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 ASB13Q8WXK3 278 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 SIGLEC8Q9NYZ4 499 aa9.78□□□□□ -0.84
SH2D3A-208ENST00000599563 FXYD6-FXYD2A0A087WZ82 144 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 CST7O76096 145 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 RLN2P04090 185 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 IFNA4P05014 189 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 P2RY1P47900 373 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 RAB11AP62491 216 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 EWSR1Q01844 656 aaKnown RBP eCLIP9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 AKAP14Q86UN6 197 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 OR1L6Q8NGR2 347 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 THAP6Q8TBB0 222 aa9.77□□□□□ -0.85
SH2D3A-208ENST00000599563 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms