RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PINX1Q96BK5 328 aaKnown RBP9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 SERTAD4Q9NUC0 356 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 HSPB11Q9Y547 144 aa9.4□□□□□ -0.9
SHKBP1-213ENST00000597325 IGLV11-55A0A075B6I3 123 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 RNF222A6NCQ9 220 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 BOLA2-SMG1P6H3BVE0 249 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 TRGV3P03979 118 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 S100A11P31949 105 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 TPPP2P59282 170 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 RHOGP84095 191 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 CFHR3Q02985 330 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 OR2F1Q13607 317 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 ZNF345Q14585 488 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 TEX38Q6PEX7 206 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 ACOT7LQ6ZUV0 252 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 ZNF329Q86UD4 541 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 LINC01006Q8NI28 216 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 TMEM170AQ8WVE7 144 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 MS4A10Q96PG2 267 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 SLA2Q9H6Q3 261 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 STARD9Q9P2P6 4700 aa9.39□□□□□ -0.91
SHKBP1-213ENST00000597325 A0A0D9SG52 128 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 SOX15O60248 233 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 OR2J3O76001 311 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 IGHG4P01861 327 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 C4BPBP20851 252 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 MFAP2P55001 183 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 FOXE3Q13461 319 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 SLC16A13Q7RTY0 426 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 KLHDC1Q8N7A1 406 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 NECAP1Q8NC96 275 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 OR4X2Q8NGF9 303 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 OR5C1Q8NGR4 320 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 SLC35E1Q96K37 410 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 FBXL7Q9UJT9 491 aa9.38□□□□□ -0.91
SHKBP1-213ENST00000597325 STAB2Q8WWQ8 2551 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 SMCO3A2RU48 225 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 SCGB2A1O75556 95 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 DFFBO76075 338 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 BRI3O95415 125 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 MT-CO2P00403 227 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 IGLV1-40P01703 118 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 ELANEP08246 267 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 GPX4P36969 197 aaPredicted RBP9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 DLK1P80370 383 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 NHLH2Q02577 135 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 AKR1C1Q04828 323 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 CD69Q07108 199 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 CLINT1Q14677 625 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 C15orf32Q32M92 178 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 PVRIGQ6DKI7 326 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 FANCD2OSQ96PS1 177 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 TMEM147Q9BVK8 224 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 GGACTQ9BVM4 153 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 SMIM3Q9BZL3 60 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 ARL6Q9H0F7 186 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 FBXL17Q9UF56 701 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 DMRT1Q9Y5R6 373 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 TNCP24821 2201 aa9.37□□□□□ -0.91
SHKBP1-213ENST00000597325 TRBV9A0A0B4J1U6 114 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 A0A0G2JLM5 398 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 KANTRA0A1W2PQU2 76 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 PMS2P5A8MQ11 134 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 CXCL2P19875 107 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 PSMB8P28062 276 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 NKX2-5P52952 324 aaPredicted RBP9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 DEFA5Q01523 94 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ATP5G2Q06055 141 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ARL16Q0P5N6 197 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ATP6V1FQ16864 119 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ACSM6Q6P461 480 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 HAPLN4Q86UW8 402 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 KCNRGQ8N5I3 272 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 OR5AU1Q8NGC0 362 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 CACNG8Q8WXS5 425 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ACY3Q96HD9 319 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 USMG5Q96IX5 58 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ATP5SQ99766 215 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 ARPC5LQ9BPX5 153 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
SHKBP1-213ENST00000597325 BORCS7-ASMTA0A0B4J1R7 106 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 UBE2L5PA0A1B0GUS4 154 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 PRSS46E5RG02 174 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 I3L2K1 104 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 K7EIL1 84 aa9.35□□□□□ -0.91
SHKBP1-213ENST00000597325 TAAR5O14804 337 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms