RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 HAPLN4Q86UW8 402 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 LILRB2Q8N423 598 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 TMEM217Q8N7C4 229 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 OR11H4Q8NGC9 324 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 VN1R17PQ8TDU5 208 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 EEF1AKMT3Q96AZ1 226 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 SLC35E1Q96K37 410 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 FNDC4Q9H6D8 234 aaPredicted RBP8.43□□□□□ -1.06
USE1-204ENST00000594399 HSPB11Q9Y547 144 aa8.43□□□□□ -1.06
USE1-204ENST00000594399 TENM1Q9UKZ4 2725 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 TCRBV4S1A1TA0A5B7 111 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 RNF222A6NCQ9 220 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 HMSDA8MTL9 139 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 S100A11P31949 105 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 GPX4P36969 197 aaPredicted RBP8.42□□□□□ -1.06
USE1-204ENST00000594399 DLK1P80370 383 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 ARL16Q0P5N6 197 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 ACSM6Q6P461 480 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 ZNF491Q8N8L2 437 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 C11orf44Q8N8P7 122 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 OR1S2Q8NGQ3 325 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 SCARB1Q8WTV0 552 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 UBE2E2Q96LR5 201 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 HYLS1Q96M11 299 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 S4R3C0 116 aa8.42□□□□□ -1.06
USE1-204ENST00000594399 ANK2Q01484 3957 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 TRBV7-1A0A0A6YYK4 115 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 SMCO3A2RU48 225 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 FNDC10F2Z333 226 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 IGHV3-11P01762 117 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 IGHV3-48P01763 117 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 IGHV3-23P01764 117 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 LGALS1P09382 135 aaKnown RBP8.41□□□□□ -1.06
USE1-204ENST00000594399 RND2P52198 227 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 AP2S1P53680 142 aaPredicted RBP8.41□□□□□ -1.06
USE1-204ENST00000594399 MFAP4P55083 255 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 NHLH2Q02577 135 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 AKR1C1Q04828 323 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 OR2F1Q13607 317 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 KIAA0141Q14154 515 aaPredicted RBP8.41□□□□□ -1.06
USE1-204ENST00000594399 ZNF345Q14585 488 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 FAM209BQ5JX69 171 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 OR5C1Q8NGR4 320 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 ZNF502Q8TBZ5 544 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 CACNG8Q8WXS5 425 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 ACY3Q96HD9 319 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 ATP6V0BQ99437 205 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
USE1-204ENST00000594399 TMEM147Q9BVK8 224 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 GGACTQ9BVM4 153 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 MFFQ9GZY8 342 aa8.41□□□□□ -1.06
USE1-204ENST00000594399 TSSC4Q9Y5U2 329 aaPredicted RBP8.41□□□□□ -1.06
USE1-204ENST00000594399 NUDT19A8MXV4 375 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 SCGB2A1O75556 95 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 FCGR2BP31994 310 aaPredicted RBP8.4□□□□□ -1.06
USE1-204ENST00000594399 GPR183P32249 361 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 CDX1P47902 265 aaPredicted RBP8.4□□□□□ -1.06
USE1-204ENST00000594399 NPBWR1P48145 328 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 GAMTQ14353 236 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 CLINT1Q14677 625 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 MLANAQ16655 118 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 Q56UQ5 140 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 C3orf56Q8N813 242 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 UBAC2Q8NBM4 344 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 TMEM116Q8NCL8 245 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 KLHL30-AS1Q8NEE0 82 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 OR4X1Q8NH49 305 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 C4orf3Q8WVX3 66 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 BSCL2Q96G97 398 aaPredicted RBP8.4□□□□□ -1.06
USE1-204ENST00000594399 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 TXN2Q99757 166 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 ATP5SQ99766 215 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 GNB4Q9HAV0 340 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 GAR1Q9NY12 217 aaKnown RBP8.4□□□□□ -1.06
USE1-204ENST00000594399 MRPL36Q9P0J6 103 aaKnown RBP8.4□□□□□ -1.06
USE1-204ENST00000594399 FBXL17Q9UF56 701 aa8.4□□□□□ -1.06
USE1-204ENST00000594399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.39□□□□□ -1.07
USE1-204ENST00000594399 UBE2L5PA0A1B0GUS4 154 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 A0A1W2PRX2 142 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 ANKRD34BA5PLL1 514 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
USE1-204ENST00000594399 GNG7O60262 68 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 CLN5O75503 358 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 DFFBO76075 338 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 EIF2B2P49770 351 aaKnown RBP8.39□□□□□ -1.07
USE1-204ENST00000594399 VWC2Q2TAL6 325 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 CLEC19AQ6UXS0 136 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 KCNRGQ8N5I3 272 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 NPIPB3Q92617 1050 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 OR5B12Q96R08 314 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 CITED1Q99966 193 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 SMIM3Q9BZL3 60 aa8.39□□□□□ -1.07
USE1-204ENST00000594399 A0A0D9SG52 128 aa8.38□□□□□ -1.07
USE1-204ENST00000594399 OR2T8A6NH00 312 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms