RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PDPNQ86YL7 162 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 KLHDC1Q8N7A1 406 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 RNF5Q99942 180 aa15.53■□□□□ 0.08
LSM4-203ENST00000593829 PPP1R2P9O14990 202 aa15.52■□□□□ 0.07
LSM4-203ENST00000593829 NBR2O15453 112 aa15.52■□□□□ 0.07
LSM4-203ENST00000593829 KRTAP10-3P60369 221 aa15.52■□□□□ 0.07
LSM4-203ENST00000593829 SSTP61278 116 aa15.52■□□□□ 0.07
LSM4-203ENST00000593829 CXorf66Q5JRM2 361 aaPredicted RBP15.52■□□□□ 0.07
LSM4-203ENST00000593829 SLC35D1Q9NTN3 355 aa15.52■□□□□ 0.07
LSM4-203ENST00000593829 IGLV2-14P01704 120 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 CNTFRP26992 372 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 DUTP33316 252 aaKnown RBP15.51■□□□□ 0.07
LSM4-203ENST00000593829 GPX4P36969 197 aaPredicted RBP15.51■□□□□ 0.07
LSM4-203ENST00000593829 DEFA6Q01524 100 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 ZNF343Q6P1L6 599 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 CMTM1Q8IZ96 169 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 NPBQ8NG41 125 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 CITED1Q99966 193 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 RFNGQ9Y644 331 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 ANK2Q01484 3957 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 H0Y980 276 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 TMEM50AO95807 157 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 IFNA10P01566 189 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 IGKV1-16P04430 117 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 RPL23AP62750 156 aaKnown RBP15.51■□□□□ 0.07
LSM4-203ENST00000593829 FLYWCH2Q96CP2 140 aaKnown RBP15.51■□□□□ 0.07
LSM4-203ENST00000593829 WNT10AQ9GZT5 417 aa15.51■□□□□ 0.07
LSM4-203ENST00000593829 TGIF2-C20orf24A0A0A6YYL0 155 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 IGHG2P01859 326 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 PAX9P55771 341 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 PMS2P11Q13670 270 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 MSMO1Q15800 293 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 RTL8BQ17RB0 113 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 MBD3L1Q8WWY6 194 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 P2RX4Q99571 388 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 CCL28Q9NRJ3 127 aa15.5■□□□□ 0.07
LSM4-203ENST00000593829 TRBV24-1A0A075B6N3 115 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 LINC00473A8K010 186 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 NDUFA3O95167 84 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 RPS16P62249 146 aaKnown RBP15.49■□□□□ 0.07
LSM4-203ENST00000593829 FAM90A2PQ658T7 463 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 OR10D4PQ8NGN7 298 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 DDB2Q92466 427 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 CYB5BO43169 146 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 C5orf64Q2M2E5 130 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 ZNF818PQ6ZRF7 136 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 ZBTB34Q8NCN2 500 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 FAM210BQ96KR6 192 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 HSD17B10Q99714 261 aaKnown RBP15.49■□□□□ 0.07
LSM4-203ENST00000593829 CTDSP1Q9GZU7 261 aa15.49■□□□□ 0.07
LSM4-203ENST00000593829 A0A1B0GU03 582 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 PHOX2AO14813 284 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 CST7O76096 145 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 TRGC2P03986 189 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 CENPVQ7Z7K6 275 aaPredicted RBP15.48■□□□□ 0.07
LSM4-203ENST00000593829 STX12Q86Y82 276 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 RAB40CQ96S21 281 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 PSMG3Q9BT73 122 aaPredicted RBP15.48■□□□□ 0.07
LSM4-203ENST00000593829 MAGT1Q9H0U3 335 aa15.48■□□□□ 0.07
LSM4-203ENST00000593829 RRHO14718 337 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 IFNA5P01569 189 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 EIF4EBP1Q13541 118 aaPredicted RBP15.47■□□□□ 0.07
LSM4-203ENST00000593829 ZNF66Q6ZN08 573 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 WIPF2Q8TF74 440 aaPredicted RBP15.47■□□□□ 0.07
LSM4-203ENST00000593829 NDUFS6O75380 124 aaKnown RBP15.47■□□□□ 0.07
LSM4-203ENST00000593829 HLA-DRB1P01911 266 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 TRGC1P0CF51 173 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 BCL2P10415 239 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 LGALS7P47929 136 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 PKIAP61925 76 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 RUNX1Q01196 453 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 PLGLAQ15195 96 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 PSG5Q15238 335 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 ABHD5Q8WTS1 349 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 HSPB9Q9BQS6 159 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 PARD6GQ9BYG4 376 aaPredicted RBP15.47■□□□□ 0.07
LSM4-203ENST00000593829 FBXL15Q9H469 300 aa15.47■□□□□ 0.07
LSM4-203ENST00000593829 LINC01548A6NM66 108 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 OPN1MWP04001 364 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 OPN1MW2P0DN77 364 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 OPN1MW3P0DN78 364 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 RPL30P62888 115 aaKnown RBP15.46■□□□□ 0.07
LSM4-203ENST00000593829 TMEM177Q53S58 311 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 REC114Q7Z4M0 266 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 GPR61Q9BZJ8 451 aa15.46■□□□□ 0.07
LSM4-203ENST00000593829 CEBPGP53567 150 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 C11orf44Q8N8P7 122 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 OR5AU1Q8NGC0 362 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 C14orf144Q96I85 54 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 HARBI1Q96MB7 349 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 NOL4LQ96MY1 436 aaPredicted RBP15.45■□□□□ 0.06
LSM4-203ENST00000593829 SDF2L1Q9HCN8 221 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 URGCP-MRPS24S4R325 110 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 TNFSF12O43508 249 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 FCGR3BO75015 233 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 S100GP29377 79 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 TMEM217Q8N7C4 229 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 FRZBQ92765 325 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 GPHA2Q96T91 129 aa15.45■□□□□ 0.06
LSM4-203ENST00000593829 PGLYRP1O75594 196 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms