RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SCGB2A2Q13296 93 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 GAMTQ14353 236 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 CLLU1Q5K131 121 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 UNQ5815/PRO19632Q6UWF5 114 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 SLC16A13Q7RTY0 426 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 TMEM144Q7Z5S9 345 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 SIGLECL1Q8N7X8 197 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 OR2G3Q8NGZ4 309 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 FAM110DQ8TAY7 271 aaPredicted RBP10.58□□□□□ -0.72
VMP1-217ENST00000593168 RNF141Q8WVD5 230 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 FNDC4Q9H6D8 234 aaPredicted RBP10.58□□□□□ -0.72
VMP1-217ENST00000593168 PLA2G2EQ9NZK7 142 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
VMP1-217ENST00000593168 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
VMP1-217ENST00000593168 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 SMCO3A2RU48 225 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
VMP1-217ENST00000593168 UMAD1C9J7I0 102 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 HOXA3O43365 443 aaPredicted RBP10.57□□□□□ -0.72
VMP1-217ENST00000593168 OPRK1P41145 380 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 BLCAPP62952 87 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 MLANAQ16655 118 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 FAM74A1Q5RGS3 127 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 TEPPQ6URK8 271 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 NPCDR1Q9BY65 106 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 ZNF580Q9UK33 172 aa10.57□□□□□ -0.72
VMP1-217ENST00000593168 IGLV11-55A0A075B6I3 123 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 C17orf112F2Z3M2 114 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 I3L2K1 104 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 NMBP08949 121 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 HIST1H1BP16401 226 aaKnown RBP10.56□□□□□ -0.72
VMP1-217ENST00000593168 AKR1C1Q04828 323 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 RAB31Q13636 194 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 C9orf152Q5JTZ5 239 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 RBMS3Q6XE24 437 aaKnown RBP10.56□□□□□ -0.72
VMP1-217ENST00000593168 C19orf35Q6ZS72 473 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 ZNF709Q8N972 641 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 OR5T1Q8NG75 326 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 ZNF418Q8TF45 676 aaPredicted RBP10.56□□□□□ -0.72
VMP1-217ENST00000593168 FANCD2OSQ96PS1 177 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 RSG1Q9BU20 258 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 THYN1Q9P016 225 aa10.56□□□□□ -0.72
VMP1-217ENST00000593168 TRAV41A0A0B4J266 112 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 TRIM77I1YAP6 450 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 MT-CO2P00403 227 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 HILS1P60008 231 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 ECSCRQ19T08 205 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 OR2T6Q8NHC8 308 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 SAT2Q96F10 170 aaPredicted RBP10.55□□□□□ -0.72
VMP1-217ENST00000593168 MGST2Q99735 147 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 KCNIP2Q9NS61 270 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 RFNGQ9Y644 331 aa10.55□□□□□ -0.72
VMP1-217ENST00000593168 G3V318 75 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 K7EIM0 57 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 AP4M1O00189 453 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 BRI3O95415 125 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 CAMLGP49069 296 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 NDUFA5Q16718 116 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 AKR1C8PQ5T2L2 129 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 TMEM182Q6ZP80 229 aaPredicted RBP10.54□□□□□ -0.72
VMP1-217ENST00000593168 THAP8Q8NA92 274 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 TMEM116Q8NCL8 245 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 NPIPB3Q92617 1050 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 GGTLC1Q9BX51 225 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 TNFRSF19Q9NS68 423 aa10.54□□□□□ -0.72
VMP1-217ENST00000593168 ZNF705EA8MWA4 302 aaPredicted RBP10.53□□□□□ -0.72
VMP1-217ENST00000593168 AGPAT2O15120 278 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 MBP02144 154 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 PRH1P02810 166 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 RPL29P47914 159 aaKnown RBP10.53□□□□□ -0.72
VMP1-217ENST00000593168 RND2P52198 227 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 AWAT1Q58HT5 328 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 DPPA3Q6W0C5 159 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 Q6ZS46 218 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 OR4X1Q8NH49 305 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 ACY3Q96HD9 319 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 PRSS22Q9GZN4 317 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 MRPL36Q9P0J6 103 aaKnown RBP10.53□□□□□ -0.72
VMP1-217ENST00000593168 SLC45A2Q9UMX9 530 aa10.53□□□□□ -0.72
VMP1-217ENST00000593168 IGKV1OR2-108A0A075B7D4 117 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 H3BUA1 57 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 CLDN34H7C241 214 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 OR10J1P30954 320 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 VN1R17PQ8TDU5 208 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
VMP1-217ENST00000593168 TRGV9Q99603 122 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 RPRMQ9NS64 109 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
VMP1-217ENST00000593168 IGKV1D-37A0A075B6S9 117 aa10.51□□□□□ -0.73
VMP1-217ENST00000593168 LINC00862A6NCI5 91 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms