RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 IGHV3-49A0A0A0MS15 119 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 A0A1B0GU03 582 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 A8MWP6 167 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 TCRBP04435 133 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 IAPPP10997 89 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 HTR2BP41595 481 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 SUB1P53999 127 aaKnown RBP eCLIP8.69□□□□□ -1.02
VMP1-211ENST00000591315 C4orf46Q504U0 113 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 BTNL8Q6UX41 500 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 SLC24A4Q8NFF2 622 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 DYNLRB2Q8TF09 96 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 WDR89Q96FK6 387 aaPredicted RBP8.69□□□□□ -1.02
VMP1-211ENST00000591315 SEC22CQ9BRL7 303 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 ZMAT5Q9UDW3 170 aaKnown RBP8.69□□□□□ -1.02
VMP1-211ENST00000591315 STAB2Q8WWQ8 2551 aa8.69□□□□□ -1.02
VMP1-211ENST00000591315 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 DUXBA0A1W2PPF3 345 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 GNG7O60262 68 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 UPK1BO75841 260 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 TMEM50AO95807 157 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 C8orf88P0DMB2 117 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 FCGR2BP31994 310 aaPredicted RBP8.68□□□□□ -1.02
VMP1-211ENST00000591315 OPRK1P41145 380 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 ZNF846Q147U1 533 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 C2orf83Q53S99 150 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 SPSB3Q6PJ21 355 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 TMEM61Q8N0U2 210 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 DTD1Q8TEA8 209 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 NUDT15Q9NV35 164 aa8.68□□□□□ -1.02
VMP1-211ENST00000591315 NDUFA4O00483 81 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 NUPL2O15504 423 aaKnown RBP8.67□□□□□ -1.02
VMP1-211ENST00000591315 YIF1AO95070 293 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 SCAF4O95104 1147 aaKnown RBP8.67□□□□□ -1.02
VMP1-211ENST00000591315 IFNA10P01566 189 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 NPY1RP25929 384 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 ASAH1Q13510 395 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 TIGITQ495A1 244 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 PRSS54Q6PEW0 395 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 DUSP18Q8NEJ0 188 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 OR10C1Q96KK4 312 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 TXN2Q99757 166 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 B9D2Q9BPU9 175 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 WDR12Q9GZL7 423 aaKnown RBP8.67□□□□□ -1.02
VMP1-211ENST00000591315 WFDC10AQ9H1F0 79 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 UFC1Q9Y3C8 167 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 TMED3Q9Y3Q3 217 aa8.67□□□□□ -1.02
VMP1-211ENST00000591315 FAM240BA0A1B0GVZ2 78 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 C15orf62A8K5M9 175 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 WRBO00258 174 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 CCSO14618 274 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 IGKV1-17P01599 117 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 APOHP02749 345 aaPredicted RBP8.66□□□□□ -1.02
VMP1-211ENST00000591315 CD7P09564 240 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 H2AFB2P0C5Z0 115 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 SLC25A6P12236 298 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 NPBWR1P48145 328 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 RND2P52198 227 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 CD69Q07108 199 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 LCN12Q6JVE5 192 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 OR4X1Q8NH49 305 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 COQ8AQ8NI60 647 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 MITD1Q8WV92 249 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 HIPK2Q9H2X6 1198 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 PALMDQ9NP74 551 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 SMAD5-AS1Q9Y6J3 95 aa8.66□□□□□ -1.02
VMP1-211ENST00000591315 IGHV3-66A0A0C4DH42 116 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 CORTO00230 105 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 CLN5O75503 358 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 IGHV4-30-4P0DP06 118 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 ELLP55199 621 aaPredicted RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 POLR2GP62487 172 aaKnown RBP eCLIP8.65□□□□□ -1.02
VMP1-211ENST00000591315 LILRB2Q8N423 598 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 RNASEH2CQ8TDP1 164 aaKnown RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 NPIPB3Q92617 1050 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 ACY3Q96HD9 319 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 ZFAND3Q9H8U3 227 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 DAZ1Q9NQZ3 744 aaKnown RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 GAR1Q9NY12 217 aaKnown RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 TECRQ9NZ01 308 aaKnown RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 MRPL27Q9P0M9 148 aaKnown RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 SMPXQ9UHP9 88 aa8.65□□□□□ -1.02
VMP1-211ENST00000591315 PAIP2BQ9ULR5 123 aaKnown RBP8.65□□□□□ -1.02
VMP1-211ENST00000591315 PUS1Q9Y606 427 aaKnown RBP eCLIP8.65□□□□□ -1.02
VMP1-211ENST00000591315 H3BP45 60 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 K7EMT4 169 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 SYNGR2O43760 224 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 IFNA4P05014 189 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 CD81P60033 236 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 ID3Q02535 119 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 RELQ04864 619 aaPredicted RBP8.64□□□□□ -1.03
VMP1-211ENST00000591315 MZT2BQ6NZ67 158 aa8.64□□□□□ -1.03
VMP1-211ENST00000591315 ZNF600Q6ZNG1 722 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms