RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 IGHV3-48P01763 117 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 CLLU1Q5K131 121 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 PCNPQ8WW12 178 aaKnown RBP13.68□□□□□ -0.22
CXXC1-212ENST00000589940 DUX5Q96PT3 197 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 MGST2Q99735 147 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 THYN1Q9P016 225 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 K7EIM0 57 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 CAMLGP49069 296 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 SERF2P84101 59 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 RAB31Q13636 194 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 KLK9Q2XQG4 91 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 LRRC20Q8TCA0 184 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 NPFFR1Q9GZQ6 430 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 MRPL36Q9P0J6 103 aaKnown RBP13.68□□□□□ -0.22
CXXC1-212ENST00000589940 LINC00527Q9UJ94 153 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 KLK9Q9UKQ9 250 aa13.68□□□□□ -0.22
CXXC1-212ENST00000589940 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 IGHV3-21A0A0B4J1V1 117 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 UMAD1C9J7I0 102 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 NMBP08949 121 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 HIST1H1BP16401 226 aaKnown RBP13.67□□□□□ -0.22
CXXC1-212ENST00000589940 RAB5CP51148 216 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 RND2P52198 227 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 TMEM116Q8NCL8 245 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 NPIPB3Q92617 1050 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 ZNF580Q9UK33 172 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 DNAJC9-AS1A6NH13 148 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 SLC7A5P1Q8MH63 180 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 GGTLC1Q9BX51 225 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 PRSS22Q9GZN4 317 aa13.67□□□□□ -0.22
CXXC1-212ENST00000589940 TRIM77I1YAP6 450 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 AGPAT2O15120 278 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 AKR1C8PQ5T2L2 129 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 NOL4LQ96MY1 436 aaPredicted RBP13.66□□□□□ -0.22
CXXC1-212ENST00000589940 NSD1Q96L73 2696 aaPredicted RBP13.66□□□□□ -0.22
CXXC1-212ENST00000589940 SOX15O60248 233 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 THAP8Q8NA92 274 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 KCNIP2Q9NS61 270 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 ZNF355PQ9NSJ1 428 aa13.66□□□□□ -0.22
CXXC1-212ENST00000589940 TRBV9A0A0B4J1U6 114 aa13.65□□□□□ -0.22
CXXC1-212ENST00000589940 ZNF705EA8MWA4 302 aaPredicted RBP13.65□□□□□ -0.22
CXXC1-212ENST00000589940 OR2J3O76001 311 aa13.65□□□□□ -0.22
CXXC1-212ENST00000589940 OR4X1Q8NH49 305 aa13.65□□□□□ -0.22
CXXC1-212ENST00000589940 CLDN34H7C241 214 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 NDUFB8O95169 186 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 PPIFP30405 207 aaKnown RBP13.64□□□□□ -0.23
CXXC1-212ENST00000589940 ELLP55199 621 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-212ENST00000589940 ACSM6Q6P461 480 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 Q71RC1 249 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-212ENST00000589940 SAT2Q96F10 170 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-212ENST00000589940 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
CXXC1-212ENST00000589940 ZNF702PQ9H963 129 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 ESM1Q9NQ30 184 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 FBXL7Q9UJT9 491 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 OR10J1P30954 320 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 FHITP49789 147 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 NDUFA5Q16718 116 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 TMEM95Q3KNT9 176 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 FFAR4Q5NUL3 377 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 SLC45A2Q9UMX9 530 aa13.64□□□□□ -0.23
CXXC1-212ENST00000589940 IGKV1D-37A0A075B6S9 117 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 ZFP92A6NM28 416 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 RPL29P47914 159 aaKnown RBP13.63□□□□□ -0.23
CXXC1-212ENST00000589940 RHOGP84095 191 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 NECAP1Q8NC96 275 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 ZNF418Q8TF45 676 aaPredicted RBP13.63□□□□□ -0.23
CXXC1-212ENST00000589940 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 CUBNO60494 3623 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 INAFM1C9JVW0 142 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 BRI3O95415 125 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 MBP02144 154 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 TMEM41BQ5BJD5 291 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 DPPA3Q6W0C5 159 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 STPG3Q8N7X2 389 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 RPRMQ9NS64 109 aa13.63□□□□□ -0.23
CXXC1-212ENST00000589940 MFSD2BA6NFX1 497 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 H3BUA1 57 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 TSPAN15O95858 294 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 B2MP61769 119 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 BLOC1S1P78537 153 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 PRR20EP86478 221 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 PRR20CP86479 221 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 PRR20DP86480 221 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 PRR20BP86481 221 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 PRR20AP86496 221 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 DEFA5Q01523 94 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 CFHR3Q02985 330 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 C15orf32Q32M92 178 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 Q6ZRG5 221 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 Q8N2B8 174 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 VN1R17PQ8TDU5 208 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 TCRBV4S1A1TA0A5B7 111 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 CLN5O75503 358 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 NPBWR1P48145 328 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 MFAP4P55083 255 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
CXXC1-212ENST00000589940 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms