RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PLB1Q6P1J6 1458 aa1.16□□□□□ -2.22
SMAD4-207ENST00000589076 MED13Q9UHV7 2174 aa1.15□□□□□ -2.22
SMAD4-207ENST00000589076 TOPBP1Q92547 1522 aa1.15□□□□□ -2.22
SMAD4-207ENST00000589076 ANAPC1Q9H1A4 1944 aa1.15□□□□□ -2.22
SMAD4-207ENST00000589076 PLXND1Q9Y4D7 1925 aa1.15□□□□□ -2.22
SMAD4-207ENST00000589076 USH2AO75445 5202 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 TGIF2-C20orf24A0A0A6YYL0 155 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 TRBV6-5A0A0K0K1A5 114 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 TRAPPC13A5PLN9 417 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 CRPP02741 224 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 METTL15P1P0C7V9 234 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H1TP22492 207 aaPredicted RBP1.15□□□□□ -2.23
SMAD4-207ENST00000589076 ZNF80P51504 273 aaPredicted RBP1.15□□□□□ -2.23
SMAD4-207ENST00000589076 SNRPD2P62316 118 aaKnown RBP1.15□□□□□ -2.23
SMAD4-207ENST00000589076 NNATQ16517 81 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 MOGQ16653 247 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 RGS21Q2M5E4 152 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 RPL22L1Q6P5R6 122 aaKnown RBP1.15□□□□□ -2.23
SMAD4-207ENST00000589076 DCXRQ7Z4W1 244 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 RPS19BP1Q86WX3 136 aaKnown RBP1.15□□□□□ -2.23
SMAD4-207ENST00000589076 C20orf196Q8IYI0 205 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 MCFD2Q8NI22 146 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 CYSTM1Q9H1C7 97 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 MED12LQ86YW9 2145 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 MYO3BQ8WXR4 1341 aa1.15□□□□□ -2.23
SMAD4-207ENST00000589076 APCP25054 2843 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 NUP155O75694 1391 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 PQLC2LA1A4F0 135 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 GOLGA6L19H0YKK7 550 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 SDCBPO00560 298 aaPredicted RBP1.14□□□□□ -2.23
SMAD4-207ENST00000589076 CHP2O43745 196 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HLA-DRB1P01911 266 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 SERPINA6P08185 405 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 RPSAP08865 295 aaKnown RBP1.14□□□□□ -2.23
SMAD4-207ENST00000589076 RPS4Y1P22090 263 aaKnown RBP1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BOP23527 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BBP33778 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 OMPP47874 163 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BDP58876 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BCP62807 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 STX5Q13190 355 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST2H2BEQ16778 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.14□□□□□ -2.23
SMAD4-207ENST00000589076 AADACL3Q5VUY0 350 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 LPCAT3Q6P1A2 487 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 FAM173BQ6P4H8 233 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 FP248Q71RG6 208 aaPredicted RBP1.14□□□□□ -2.23
SMAD4-207ENST00000589076 DHFR2Q86XF0 187 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 OR5B17Q8NGF7 314 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 OR8B3Q8NGG8 313 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 RASSF5Q8WWW0 418 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 C11orf40Q8WZ69 217 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 KLK6Q92876 244 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BHQ93079 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 Q96M85 177 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 CCDC42Q96M95 316 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BNQ99877 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 HIST1H2BMQ99879 126 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 DERL1Q9BUN8 251 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 COMMD5Q9GZQ3 224 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 CMTM6Q9NX76 183 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 VPS29Q9UBQ0 182 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 MICAL3Q7RTP6 2002 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 WRNQ14191 1432 aaPredicted RBP eCLIP1.14□□□□□ -2.23
SMAD4-207ENST00000589076 NCOA1Q15788 1441 aa1.14□□□□□ -2.23
SMAD4-207ENST00000589076 LAMB2P55268 1798 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 MTUS2Q5JR59 1369 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 KIF24Q5T7B8 1368 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 CLDN24A6NM45 220 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 IBA57-AS1B1ANH7 110 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 IGKV1-5P01602 117 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 ARL14EPLP0DKL9 152 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 EIF2B2P49770 351 aaKnown RBP1.13□□□□□ -2.23
SMAD4-207ENST00000589076 SUPT4H1P63272 117 aaKnown RBP1.13□□□□□ -2.23
SMAD4-207ENST00000589076 Q1T7F1 81 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 ACOT6Q3I5F7 207 aaPredicted RBP1.13□□□□□ -2.23
SMAD4-207ENST00000589076 SPANXN3Q5MJ09 141 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 Q6ZSA8 131 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 TRAPPC5Q8IUR0 188 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 CLDN22Q8N7P3 220 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 OR13C4Q8NGS5 318 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 DCUN1D1Q96GG9 259 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 FBXL12Q9NXK8 326 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 BAIAP2Q9UQB8 552 aa1.13□□□□□ -2.23
SMAD4-207ENST00000589076 ZNF106Q9H2Y7 1883 aaKnown RBP1.13□□□□□ -2.23
SMAD4-207ENST00000589076 HECW1Q76N89 1606 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 DPRXA6NFQ7 191 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 RPP14O95059 124 aaKnown RBP1.12□□□□□ -2.23
SMAD4-207ENST00000589076 RPL5P46777 297 aaKnown RBP1.12□□□□□ -2.23
SMAD4-207ENST00000589076 HBA1P69905 142 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 ITGB3BPQ13352 177 aaPredicted RBP1.12□□□□□ -2.23
SMAD4-207ENST00000589076 SPOPLQ6IQ16 392 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 PPP1R2P1Q96PQ5 205 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 SCGB3A1Q96QR1 104 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 TSPAN32Q96QS1 320 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 YIPF3Q9GZM5 350 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 LHFPL6Q9Y693 200 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 TMEM56-RWDD3S4R434 201 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 RP1P56715 2156 aa1.12□□□□□ -2.23
SMAD4-207ENST00000589076 VPS13AQ96RL7 3174 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms