RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 OR4X1Q8NH49 305 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 SCARB1Q8WTV0 552 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 C4orf3Q8WVX3 66 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 TNFSF18Q9UNG2 199 aa13.18□□□□□ -0.3
SCAMP4-211ENST00000588907 IGSF23A1L1A6 192 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 PMS2P5A8MQ11 134 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 G3V3Q6 166 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 LGALS1P09382 135 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 RUNX1Q01196 453 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 SLC38A11Q08AI6 406 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 KIAA0141Q14154 515 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 Q5BKY6 102 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 ZNF343Q6P1L6 599 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 SPSB3Q6PJ21 355 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 LILRB2Q8N423 598 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 OR1S2Q8NGQ3 325 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 CITED1Q99966 193 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 ZNF747Q9BV97 191 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 HSPB11Q9Y547 144 aa13.17□□□□□ -0.3
SCAMP4-211ENST00000588907 TRAV30A0A087WSZ9 112 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 MFSD2BA6NFX1 497 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 CST7O76096 145 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 ZNF345Q14585 488 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 ACSM6Q6P461 480 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 ACOT7LQ6ZUV0 252 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 C3orf56Q8N813 242 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 ZNF502Q8TBZ5 544 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 BSCL2Q96G97 398 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 CITED2Q99967 270 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 NEURL2Q9BR09 285 aa13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 FNDC4Q9H6D8 234 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-211ENST00000588907 NUDT19A8MXV4 375 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 DFFBO76075 338 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 OR2F1Q13607 317 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 ZFP69Q49AA0 526 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 Q56UQ5 140 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 LCNL1Q6ZST4 164 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 TMEM147Q9BVK8 224 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 UQCC1Q9NVA1 299 aa13.15□□□□□ -0.3
SCAMP4-211ENST00000588907 SMLR1H3BR10 107 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 ARPC5O15511 151 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 GNG7O60262 68 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 CLN5O75503 358 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 FABP1P07148 127 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 AKR1C1Q04828 323 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 GAMTQ14353 236 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 C11orf44Q8N8P7 122 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 KLHL30-AS1Q8NEE0 82 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 NPVFQ9HCQ7 196 aa13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 PEF1Q9UBV8 284 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-211ENST00000588907 FBN1P35555 2871 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 A0A0D9SG52 128 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 I3L521 148 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 RND2P52198 227 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 AP2S1P53680 142 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 DEFA5Q01523 94 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 NHLH2Q02577 135 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 ZNF266Q14584 549 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 VWC2Q2TAL6 325 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 TMEM144Q7Z5S9 345 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 HAPLN4Q86UW8 402 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 UBAC2Q8NBM4 344 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 ACY3Q96HD9 319 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 GNB4Q9HAV0 340 aa13.13□□□□□ -0.31
SCAMP4-211ENST00000588907 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 SMCO3A2RU48 225 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 RNF222A6NCQ9 220 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 TAAR5O14804 337 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 MPDU1O75352 247 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 HSPB1P04792 205 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 CLEC3BP05452 202 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 ZP3P21754 424 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 GPR183P32249 361 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 RELQ04864 619 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 ARL16Q0P5N6 197 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 RAB31Q13636 194 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 NPIPB3Q92617 1050 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 ATP5SQ99766 215 aa13.12□□□□□ -0.31
SCAMP4-211ENST00000588907 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 TGOLN2O43493 480 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 GGCTO75223 188 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 OR10J1P30954 320 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 ARL3P36405 182 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 TEPPQ6URK8 271 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 THAP8Q8NA92 274 aa13.11□□□□□ -0.31
SCAMP4-211ENST00000588907 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms