RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 LPCAT3Q6P1A2 487 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 RABAC1Q9UI14 185 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 HSPG2P98160 4391 aa13.3□□□□□ -0.28
CCDC43-204ENST00000588687 TRAV10A0A0B4J240 114 aa13.29□□□□□ -0.28
CCDC43-204ENST00000588687 KNCNA6PVL3 124 aa13.29□□□□□ -0.28
CCDC43-204ENST00000588687 AMBPP02760 352 aa13.29□□□□□ -0.28
CCDC43-204ENST00000588687 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
CCDC43-204ENST00000588687 MORN3Q6PF18 240 aaPredicted RBP13.29□□□□□ -0.28
CCDC43-204ENST00000588687 LINC00336Q6ZUF6 198 aa13.29□□□□□ -0.28
CCDC43-204ENST00000588687 IGKV1-17P01599 117 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 ZNF688P0C7X2 276 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 P2RY1P47900 373 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 PPP5CP53041 499 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 RND3P61587 244 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 RPL11P62913 178 aaKnown RBP13.28□□□□□ -0.28
CCDC43-204ENST00000588687 STXBP6Q8NFX7 210 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 TP53RKQ96S44 253 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 RNF126Q9BV68 326 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 Q9H521 79 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 TMEM231Q9H6L2 316 aa13.28□□□□□ -0.28
CCDC43-204ENST00000588687 CLN5O75503 358 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 NPPCP23582 126 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 S100GP29377 79 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 TSPAN5P62079 268 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 KCTD21Q4G0X4 260 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 LHFPL1Q86WI0 220 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 OR4X1Q8NH49 305 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 SCPEP1Q9HB40 452 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 CLEC5AQ9NY25 188 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 U3KQE9 123 aa13.27□□□□□ -0.29
CCDC43-204ENST00000588687 A0A0G2JRQ6 117 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 RCVRNP35243 200 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 C12orf74Q32Q52 190 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 SLC35G3Q8N808 338 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 YIPF6Q96EC8 236 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 METTL26Q96S19 204 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 SCRT1Q9BWW7 348 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 TBC1D24Q9ULP9 559 aa13.26□□□□□ -0.29
CCDC43-204ENST00000588687 A0A1W2PS18 150 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 CORTO00230 105 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 RTL8CO15255 209 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 PI3P19957 117 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 SNCAP37840 140 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 MLANAQ16655 118 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
CCDC43-204ENST00000588687 M0QYG6 137 aa13.24□□□□□ -0.29
CCDC43-204ENST00000588687 APOA1P02647 267 aa13.24□□□□□ -0.29
CCDC43-204ENST00000588687 RPL5P46777 297 aaKnown RBP13.24□□□□□ -0.29
CCDC43-204ENST00000588687 LSM3P62310 102 aaKnown RBP13.24□□□□□ -0.29
CCDC43-204ENST00000588687 AARDQ4LEZ3 155 aa13.24□□□□□ -0.29
CCDC43-204ENST00000588687 SNX29P2Q8IUI4 249 aa13.24□□□□□ -0.29
CCDC43-204ENST00000588687 GLMPQ8WWB7 406 aa13.24□□□□□ -0.29
CCDC43-204ENST00000588687 ZNF486Q96H40 463 aaPredicted RBP13.24□□□□□ -0.29
CCDC43-204ENST00000588687 MUC4Q99102 2169 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 OPRK1P41145 380 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 ETV6P41212 452 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 AKR1C2P52895 323 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 PIGPP57054 158 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 TIGITQ495A1 244 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 ZNF767PQ75MW2 155 aa13.23□□□□□ -0.29
CCDC43-204ENST00000588687 IFNA17P01571 189 aa13.22□□□□□ -0.29
CCDC43-204ENST00000588687 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
CCDC43-204ENST00000588687 MED14OSP0DP75 135 aa13.22□□□□□ -0.29
CCDC43-204ENST00000588687 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
CCDC43-204ENST00000588687 Q6ZRM9 215 aa13.22□□□□□ -0.29
CCDC43-204ENST00000588687 RAB40CQ96S21 281 aa13.22□□□□□ -0.29
CCDC43-204ENST00000588687 LRP1BQ9NZR2 4599 aa13.22□□□□□ -0.29
CCDC43-204ENST00000588687 DEFB131BA0A096LNP1 70 aa13.21□□□□□ -0.29
CCDC43-204ENST00000588687 ELK1P19419 428 aa13.21□□□□□ -0.29
CCDC43-204ENST00000588687 PSMG4Q5JS54 123 aa13.21□□□□□ -0.29
CCDC43-204ENST00000588687 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.29
CCDC43-204ENST00000588687 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.29
CCDC43-204ENST00000588687 COMMD3Q9UBI1 195 aa13.21□□□□□ -0.29
CCDC43-204ENST00000588687 C3orf85A0A1B0GTC6 90 aa13.2□□□□□ -0.3
CCDC43-204ENST00000588687 HELTA6NFD8 242 aa13.2□□□□□ -0.3
CCDC43-204ENST00000588687 UCP1P25874 307 aa13.2□□□□□ -0.3
CCDC43-204ENST00000588687 SUB1P53999 127 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC43-204ENST00000588687 DHRS2Q13268 280 aa13.2□□□□□ -0.3
CCDC43-204ENST00000588687 USF2Q15853 346 aaPredicted RBP13.2□□□□□ -0.3
CCDC43-204ENST00000588687 TMEM170AQ8WVE7 144 aa13.2□□□□□ -0.3
CCDC43-204ENST00000588687 FAM90A26D6RGX4 464 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 PGAM2P15259 253 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 NCS1P62166 190 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 SP6Q3SY56 376 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 PRSS54Q6PEW0 395 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 ARRDC1Q8N5I2 433 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 TMEM230Q96A57 120 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 KLK11Q9UBX7 282 aa13.19□□□□□ -0.3
CCDC43-204ENST00000588687 PRSS29PA6NIE9 313 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 H3BMM0 161 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 HPGDSO60760 199 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 CD74P04233 296 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 CD3DP04234 171 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 HNRNPCP07910 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC43-204ENST00000588687 P0DMU3 169 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 FAM231AP0DMU4 169 aa13.18□□□□□ -0.3
CCDC43-204ENST00000588687 FAM231CP0DMU5 169 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms