RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 MUC4Q99102 2169 aa11.76□□□□□ -0.53
NPC1-205ENST00000587163 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 CRYBB3P26998 211 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 MLANAQ16655 118 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 TMEM69Q5SWH9 247 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 DCANP1Q8TF63 244 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 TMEM231Q9H6L2 316 aa11.75□□□□□ -0.53
NPC1-205ENST00000587163 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
NPC1-205ENST00000587163 AMBPP02760 352 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 PRSS3P35030 304 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 P2RY1P47900 373 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 UBE2NLQ5JXB2 153 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 FNDC4Q9H6D8 234 aaPredicted RBP11.74□□□□□ -0.53
NPC1-205ENST00000587163 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
NPC1-205ENST00000587163 A0A0B4J293 547 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 A0A1W2PS18 150 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 IGKV1-5P01602 117 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 SNCAP37840 140 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 TSPAN5P62079 268 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 SAMD12Q8N8I0 201 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 METTL26Q96S19 204 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 RAB40CQ96S21 281 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 KRTAP4-5Q9BYR2 181 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 ABCA13Q86UQ4 5058 aa11.73□□□□□ -0.53
NPC1-205ENST00000587163 INS-IGF2F8WCM5 200 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 TMEM127O75204 238 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 CLN5O75503 358 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 P0DMU3 169 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 RNASE2P10153 161 aaKnown RBP11.72□□□□□ -0.53
NPC1-205ENST00000587163 S100GP29377 79 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 TMEM230Q96A57 120 aa11.72□□□□□ -0.53
NPC1-205ENST00000587163 YTHDF1Q9BYJ9 559 aaKnown RBP11.72□□□□□ -0.53
NPC1-205ENST00000587163 IGKV1-17P01599 117 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 P0C879 139 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
NPC1-205ENST00000587163 ETV6P41212 452 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 UCP3P55916 312 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 TIGITQ495A1 244 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 SLC35G3Q8N808 338 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 OR4X1Q8NH49 305 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 GPX8Q8TED1 209 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 U3KQE9 123 aa11.71□□□□□ -0.53
NPC1-205ENST00000587163 IFNA17P01571 189 aa11.7□□□□□ -0.54
NPC1-205ENST00000587163 DHRS2Q13268 280 aa11.7□□□□□ -0.54
NPC1-205ENST00000587163 NEDD8Q15843 81 aa11.7□□□□□ -0.54
NPC1-205ENST00000587163 LGALS9BQ3B8N2 356 aa11.7□□□□□ -0.54
NPC1-205ENST00000587163 PSMG4Q5JS54 123 aa11.7□□□□□ -0.54
NPC1-205ENST00000587163 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
NPC1-205ENST00000587163 PI3P19957 117 aa11.69□□□□□ -0.54
NPC1-205ENST00000587163 OPRK1P41145 380 aa11.69□□□□□ -0.54
NPC1-205ENST00000587163 SUB1P53999 127 aaKnown RBP eCLIP11.69□□□□□ -0.54
NPC1-205ENST00000587163 CROCCP3Q8IVE0 287 aa11.69□□□□□ -0.54
NPC1-205ENST00000587163 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
NPC1-205ENST00000587163 IGLV2-18A0A075B6J9 118 aa11.68□□□□□ -0.54
NPC1-205ENST00000587163 HELTA6NFD8 242 aa11.68□□□□□ -0.54
NPC1-205ENST00000587163 CORTO00230 105 aa11.68□□□□□ -0.54
NPC1-205ENST00000587163 RPL5P46777 297 aaKnown RBP11.68□□□□□ -0.54
NPC1-205ENST00000587163 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
NPC1-205ENST00000587163 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
NPC1-205ENST00000587163 GLMPQ8WWB7 406 aa11.68□□□□□ -0.54
NPC1-205ENST00000587163 M0QYG6 137 aa11.67□□□□□ -0.54
NPC1-205ENST00000587163 NPY1RP25929 384 aa11.67□□□□□ -0.54
NPC1-205ENST00000587163 BSXQ3C1V8 233 aa11.67□□□□□ -0.54
NPC1-205ENST00000587163 KCTD21Q4G0X4 260 aa11.67□□□□□ -0.54
NPC1-205ENST00000587163 Q6ZR54 194 aa11.67□□□□□ -0.54
NPC1-205ENST00000587163 NARS2Q96I59 477 aaKnown RBP11.67□□□□□ -0.54
NPC1-205ENST00000587163 A0A0G2JRQ6 117 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 FAM90A26D6RGX4 464 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 H3BMM0 161 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 CD74P04233 296 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 PGAM2P15259 253 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
NPC1-205ENST00000587163 AKR1C2P52895 323 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 RND3P61587 244 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 LSM3P62310 102 aaKnown RBP11.66□□□□□ -0.54
NPC1-205ENST00000587163 Q6ZRM9 215 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 SNX29P2Q8IUI4 249 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 C1QTNF4Q9BXJ3 329 aa11.66□□□□□ -0.54
NPC1-205ENST00000587163 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 IFNA10P01566 189 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 HNRNPCP07910 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
NPC1-205ENST00000587163 IGLC1P0CG04 106 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 RCVRNP35243 200 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 EMP1P54849 157 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 PIGPP57054 158 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 NUTF2P61970 127 aaKnown RBP11.65□□□□□ -0.54
NPC1-205ENST00000587163 DHODHQ02127 395 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 USF2Q15853 346 aaPredicted RBP11.65□□□□□ -0.54
NPC1-205ENST00000587163 SP6Q3SY56 376 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 PDCD10Q9BUL8 212 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 SCPEP1Q9HB40 452 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
NPC1-205ENST00000587163 C3orf85A0A1B0GTC6 90 aa11.64□□□□□ -0.55
NPC1-205ENST00000587163 IFNA21P01568 189 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms