RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 P2RY1P47900 373 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 NPBWR1P48145 328 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 TAS2R46P59540 309 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 TMEM41BQ5BJD5 291 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 ACTL10Q5JWF8 245 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 Q6ZR54 194 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 H2BFWTQ7Z2G1 175 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 OR6F1Q8NGZ6 308 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 OR4A16Q8NH70 328 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 TBC1D24Q9ULP9 559 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 RAB26Q9ULW5 256 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 U3KQE9 123 aa8.52□□□□□ -1.05
BRCA1-225ENST00000586385 A0A0B4J293 547 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 INS-IGF2F8WCM5 200 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
BRCA1-225ENST00000586385 NPPCP23582 126 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 HLA-DMAP28067 261 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 LGALS9BQ3B8N2 356 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 RAB40CQ96S21 281 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 HSPG2P98160 4391 aa8.51□□□□□ -1.05
BRCA1-225ENST00000586385 CLN5O75503 358 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 CD74P04233 296 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 P0DMU3 169 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 ERHP84090 104 aaKnown RBP8.5□□□□□ -1.05
BRCA1-225ENST00000586385 GPX8Q8TED1 209 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 TMEM231Q9H6L2 316 aa8.5□□□□□ -1.05
BRCA1-225ENST00000586385 UCP3P55916 312 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 BSXQ3C1V8 233 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 TIGITQ495A1 244 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 UBE2NLQ5JXB2 153 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 TMEM69Q5SWH9 247 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 SAMD12Q8N8I0 201 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 OR4X1Q8NH49 305 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 GLMPQ8WWB7 406 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 S100A16Q96FQ6 103 aaKnown RBP8.49□□□□□ -1.05
BRCA1-225ENST00000586385 METTL26Q96S19 204 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 NDUFAF3Q9BU61 184 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 VCX3BQ9H321 246 aa8.49□□□□□ -1.05
BRCA1-225ENST00000586385 IGLV2-18A0A075B6J9 118 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 A0A0G2JRQ6 117 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 A0A1W2PS18 150 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 H3BMM0 161 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 PI3P19957 117 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 PRSS3P35030 304 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 RPS19P39019 145 aaKnown RBP8.48□□□□□ -1.05
BRCA1-225ENST00000586385 ETV6P41212 452 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 C16orf54Q6UWD8 224 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-225ENST00000586385 TP53RKQ96S44 253 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 XCL2Q9UBD3 114 aa8.48□□□□□ -1.05
BRCA1-225ENST00000586385 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 TMEM127O75204 238 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 IGLC1P0CG04 106 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 SNCAP37840 140 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 RPL5P46777 297 aaKnown RBP8.47□□□□□ -1.05
BRCA1-225ENST00000586385 DEFB1P60022 68 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 DHRS2Q13268 280 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 NEDD8Q15843 81 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 LPCAT3Q6P1A2 487 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 Q6ZRM9 215 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
BRCA1-225ENST00000586385 HELTA6NFD8 242 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-225ENST00000586385 M0QYG6 137 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 ZNF705DP0CH99 300 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-225ENST00000586385 ZNF705BP0CI00 300 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-225ENST00000586385 OPRK1P41145 380 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 RND3P61587 244 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 TSPAN5P62079 268 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 USF2Q15853 346 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-225ENST00000586385 KCTD21Q4G0X4 260 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 TMEM170AQ8WVE7 144 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 YTHDF1Q9BYJ9 559 aaKnown RBP8.46□□□□□ -1.06
BRCA1-225ENST00000586385 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
BRCA1-225ENST00000586385 CORTO00230 105 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 NXPH3O95157 252 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 IFNA17P01571 189 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 HOXA1P49639 335 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-225ENST00000586385 AARDQ4LEZ3 155 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 GDF5OSQ5U4N7 250 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 PRSS54Q6PEW0 395 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 TMEM230Q96A57 120 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 NEU1Q99519 415 aa8.45□□□□□ -1.06
BRCA1-225ENST00000586385 HNRNPCP07910 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
BRCA1-225ENST00000586385 HLA-DRB4P13762 266 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 S100GP29377 79 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 PIGPP57054 158 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 DHODHQ02127 395 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 SP6Q3SY56 376 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 GSG1LQ6UXU4 331 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 SNX29P2Q8IUI4 249 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 CROCCP3Q8IVE0 287 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 CENPSQ8N2Z9 138 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 DKK2Q9UBU2 259 aa8.44□□□□□ -1.06
BRCA1-225ENST00000586385 HLA-DRB4X5D2U9 266 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms