RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AVPI1Q5T686 147 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SMIM29Q86T20 159 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 NAA40Q86UY6 237 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 NDUFA11Q86Y39 141 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM71E2Q8N5Q1 922 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF525Q8N782 197 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CSNK1G2-AS1Q8NCQ2 148 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR5T1Q8NG75 326 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2Z1Q8NG97 314 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR8B12Q8NGG6 310 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 BAALCQ8WXS3 180 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RPEQ96AT9 228 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GALMQ96C23 342 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CIB3Q96Q77 187 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 PRRT1Q99946 306 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SMR3AQ99954 134 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC25A21Q9BQT8 299 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CCDC32Q9BV29 185 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MAP1LC3CQ9BXW4 147 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR51V1Q9H2C8 321 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GPR84Q9NQS5 396 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 VNN3Q9NY84 501 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RPUSD1Q9UJJ7 312 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GNG8Q9UK08 70 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF222Q9UK12 451 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ANAPC10Q9UM13 185 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MGAQ8IWI9 3026 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 DOCK10Q96BY6 2186 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 IGKV1D-8A0A087WSZ0 117 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 A6NDX4 124 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM223BA6NKX1 122 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR2AT4A6NND4 320 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF705GA8MUZ8 300 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CDC42EP2O14613 210 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 PIAS1O75925 651 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 TSPAN13O95857 204 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 HAND1O96004 215 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CD8AP01732 235 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 IGHV1-8P0DP01 117 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RAB4AP20338 218 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CRHBPP24387 322 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MYCNOSP40205 109 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR1E2P47887 323 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RBM11P57052 281 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 TCTAP57738 103 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 DEFA1P59665 94 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 DEFA3P59666 94 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 HERVK_113P61574 105 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MADCAM1Q13477 382 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 HMGN3Q15651 99 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM120AOSQ5T036 256 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 KPRPQ5T749 579 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC25A48Q6ZT89 311 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 LYPD6Q86Y78 171 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM223AQ8IWN6 122 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 BOD1L2Q8IYS8 172 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC7A5P1Q8MH63 180 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 Q8N9W7 124 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 OR4X2Q8NGF9 303 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CLDND2Q8NHS1 167 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 LINC01560Q8TB33 94 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CASTOR1Q8WTX7 329 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 C16orf74Q96GX8 76 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 NARS2Q96I59 477 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 FAM210AQ96ND0 272 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GPR82Q96P67 336 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 C6orf62Q9GZU0 229 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 NECAP2Q9NVZ3 263 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CSAG2Q9Y5P2 127 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 CCDC88CQ9P219 2028 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GON4LQ3T8J9 2241 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 F5H5K5 113 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SMLR1H3BR10 107 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 PFDN1O60925 122 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RLN2P04090 185 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 SLC2A1P11166 492 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZP3P21754 424 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 HRH1P35367 487 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MPV17P39210 176 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RND2P52198 227 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 LMO4P61968 165 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 HLA-DRB3P79483 266 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 DEFA6Q01524 100 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 VAX1Q5SQQ9 334 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 WDR82Q6UXN9 313 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 C16orf47Q6ZP98 133 aaPredicted RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZNF584Q8IVC4 421 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 C11orf42Q8N5U0 333 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 ZDHHC22Q8N966 263 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GDPD1Q8N9F7 314 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 WFDC11Q8NEX6 87 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 RXFP4Q8TDU9 374 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 GHSRQ92847 366 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 DERL3Q96Q80 235 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MGLLQ99685 303 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM208Q9BTX3 173 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 MRPL20Q9BYC9 149 aaKnown RBP1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 TMEM133Q9H2Q1 129 aa1.44□□□□□ -2.18
SMCHD1-211ENST00000584897 IFI27L2Q9H2X8 130 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms