RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 RNF212Q495C1 297 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 TEPPQ6URK8 271 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 OR1L8Q8NGR8 309 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 CIB3Q96Q77 187 aaPredicted RBP8.29□□□□□ -1.08
RFFL-212ENST00000584655 GGACTQ9BVM4 153 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 NBEAL2Q6ZNJ1 2754 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 A0A1W2PPI3 338 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 LINC01548A6NM66 108 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 NPIPB11E5RHQ5 1161 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 COX7A2P2O60397 106 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 GATA4P43694 442 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 S100A12P80511 92 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 ICAM4Q14773 271 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 Q56UQ5 140 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 MRPL41Q8IXM3 137 aaKnown RBP8.29□□□□□ -1.08
RFFL-212ENST00000584655 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 WFDC12Q8WWY7 111 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 DIRC2Q96SL1 478 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
RFFL-212ENST00000584655 FOXA2Q9Y261 457 aaPredicted RBP8.29□□□□□ -1.08
RFFL-212ENST00000584655 IGHV4-61A0A0C4DH41 118 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 ZNF705FA8MVS1 300 aaPredicted RBP8.28□□□□□ -1.08
RFFL-212ENST00000584655 ZNF705DP0CH99 300 aaPredicted RBP8.28□□□□□ -1.08
RFFL-212ENST00000584655 ZNF705BP0CI00 300 aaPredicted RBP8.28□□□□□ -1.08
RFFL-212ENST00000584655 CRYBB3P26998 211 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 TMEM155Q4W5P6 130 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 TRAT1Q6PIZ9 186 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 F8P00451 2351 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 IGKV1OR2-108A0A075B7D4 117 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 UPK2O00526 184 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 SMIM6P0DI80 62 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 TMEM95Q3KNT9 176 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 CLDND2Q8NHS1 167 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 FNDC4Q9H6D8 234 aaPredicted RBP8.28□□□□□ -1.08
RFFL-212ENST00000584655 J3QKU1 62 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 TGFAP01135 160 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 ACOT6Q3I5F7 207 aaPredicted RBP8.28□□□□□ -1.08
RFFL-212ENST00000584655 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 TMEM14EPQ6UXP3 125 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 BCL6BQ8N143 479 aaPredicted RBP8.28□□□□□ -1.08
RFFL-212ENST00000584655 ZBTB34Q8NCN2 500 aa8.28□□□□□ -1.08
RFFL-212ENST00000584655 IGHV4-30-2A0A087WSY4 118 aa8.27□□□□□ -1.08
RFFL-212ENST00000584655 PIGBOS1A0A0B4J2F0 54 aa8.27□□□□□ -1.08
RFFL-212ENST00000584655 C17orf112F2Z3M2 114 aa8.27□□□□□ -1.08
RFFL-212ENST00000584655 SRD5A1P18405 259 aa8.27□□□□□ -1.08
RFFL-212ENST00000584655 UBE2L3P68036 154 aaKnown RBP8.27□□□□□ -1.08
RFFL-212ENST00000584655 C7orf69Q9H7B7 122 aa8.27□□□□□ -1.08
RFFL-212ENST00000584655 JKAMPQ9P055 326 aa8.27□□□□□ -1.08
RFFL-212ENST00000584655 ZNF320A2RRD8 509 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 OR2T8A6NH00 312 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 MT-CO2P00403 227 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 BCL2P10415 239 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 LYL1P12980 280 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 IL3RAP26951 378 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 SRSF2Q01130 221 aaKnown RBP8.27□□□□□ -1.09
RFFL-212ENST00000584655 C21orf62-AS1Q17RA5 79 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 OR5AU1Q8NGC0 362 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 BUB1B-PAK6H3BSN5 160 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 IFNA1P01562 189 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 HLA-DRB5Q30154 266 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 SRSF12Q8WXF0 261 aaKnown RBP8.27□□□□□ -1.09
RFFL-212ENST00000584655 GGTLC1Q9BX51 225 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 NPVFQ9HCQ7 196 aa8.27□□□□□ -1.09
RFFL-212ENST00000584655 TRAV8-1A0A0A6YYK1 113 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 RNF223E7ERA6 249 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 IGHV4-39P01824 125 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 HBE1P02100 147 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 SAA4P35542 130 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 FAM169BQ8N8A8 192 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 FAM168AQ92567 244 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 IL22RA2Q969J5 263 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 NOL4LQ96MY1 436 aaPredicted RBP8.26□□□□□ -1.09
RFFL-212ENST00000584655 P2RX4Q99571 388 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 WNT10AQ9GZT5 417 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 PRNDQ9UKY0 176 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 CXCL1P09341 107 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 RPP30P78346 268 aaKnown RBP8.26□□□□□ -1.09
RFFL-212ENST00000584655 SLC35E3Q7Z769 313 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 PPP1R27Q86WC6 154 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 Q8N7P7 452 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 DEFB104AQ8WTQ1 72 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 FAM210BQ96KR6 192 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 ATG101Q9BSB4 218 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 PRORYQ9H606 182 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 RAB9BQ9NP90 201 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 A0A087X0M5 115 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 A0A1B0GX30 115 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 SRP19P09132 144 aaKnown RBP8.26□□□□□ -1.09
RFFL-212ENST00000584655 CGB3P0DN86 165 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 CGB7P0DN87 165 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 KIAA1644Q3SXP7 199 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 TEX36Q5VZQ5 186 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 ZNF114Q8NC26 417 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 PARLQ9H300 379 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 TUBG2Q9NRH3 451 aa8.26□□□□□ -1.09
RFFL-212ENST00000584655 DPM3Q9P2X0 92 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms