RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 C21orf62Q9NYP8 219 aa14.22□□□□□ -0.13
RFFL-211ENST00000584541 MFSD2BA6NFX1 497 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 PMS2P5A8MQ11 134 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 NUDT19A8MXV4 375 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 IGHV3-11P01762 117 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 S100A11P31949 105 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 KRTAP10-3P60369 221 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 KIAA0141Q14154 515 aaPredicted RBP14.21□□□□□ -0.13
RFFL-211ENST00000584541 LILRB2Q8N423 598 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 TMEM217Q8N7C4 229 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 FNDC4Q9H6D8 234 aaPredicted RBP14.21□□□□□ -0.13
RFFL-211ENST00000584541 S4R3C0 116 aa14.21□□□□□ -0.13
RFFL-211ENST00000584541 PRSS46E5RG02 174 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 IGHV3-48P01763 117 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 C1QBP02746 253 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 NPBWR1P48145 328 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 DLK1P80370 383 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 NHLH2Q02577 135 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 SLC38A11Q08AI6 406 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 Q56UQ5 140 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 ZNF343Q6P1L6 599 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 UBAC2Q8NBM4 344 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 KLHL30-AS1Q8NEE0 82 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 OR1S2Q8NGQ3 325 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 C4orf3Q8WVX3 66 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 AQP10Q96PS8 301 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 OR5B12Q96R08 314 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 ATP6V0BQ99437 205 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 TXN2Q99757 166 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 NEURL2Q9BR09 285 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 GGACTQ9BVM4 153 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 TNFSF18Q9UNG2 199 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 HSPB11Q9Y547 144 aa14.2□□□□□ -0.14
RFFL-211ENST00000584541 ARPC5O15511 151 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 GNG7O60262 68 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 IGHV3-23P01764 117 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 LGALS1P09382 135 aaKnown RBP14.19□□□□□ -0.14
RFFL-211ENST00000584541 MLANAQ16655 118 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 ATP6V1FQ16864 119 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 ACOT7LQ6ZUV0 252 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 HAPLN4Q86UW8 402 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 NDUFA11Q86Y39 141 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 ZNF502Q8TBZ5 544 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 CITED1Q99966 193 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 ZNF747Q9BV97 191 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 GNB4Q9HAV0 340 aa14.19□□□□□ -0.14
RFFL-211ENST00000584541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.18□□□□□ -0.14
RFFL-211ENST00000584541 A0A1W2PRX2 142 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 SMCO3A2RU48 225 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 HMSDA8MTL9 139 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 FNDC10F2Z333 226 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 FCGR2BP31994 310 aaPredicted RBP14.18□□□□□ -0.14
RFFL-211ENST00000584541 AKR1C1Q04828 323 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 ARL16Q0P5N6 197 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 ZFP69Q49AA0 526 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 CLEC19AQ6UXS0 136 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 OR5C1Q8NGR4 320 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 OR4X1Q8NH49 305 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 ACY3Q96HD9 319 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 HYLS1Q96M11 299 aa14.18□□□□□ -0.14
RFFL-211ENST00000584541 PEF1Q9UBV8 284 aaKnown RBP14.18□□□□□ -0.14
RFFL-211ENST00000584541 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 GPR183P32249 361 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 RND2P52198 227 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 CD300CQ08708 224 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 GAMTQ14353 236 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 TMEM116Q8NCL8 245 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 OR11H4Q8NGC9 324 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 NPIPB3Q92617 1050 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 BSCL2Q96G97 398 aaPredicted RBP14.17□□□□□ -0.14
RFFL-211ENST00000584541 CCDC140Q96MF4 163 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 TMEM147Q9BVK8 224 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 MFFQ9GZY8 342 aa14.17□□□□□ -0.14
RFFL-211ENST00000584541 OR2T8A6NH00 312 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 NUPL2O15504 423 aaKnown RBP14.16□□□□□ -0.14
RFFL-211ENST00000584541 CLN5O75503 358 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 CLEC3BP05452 202 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 AP2S1P53680 142 aaPredicted RBP14.16□□□□□ -0.14
RFFL-211ENST00000584541 RUNX1Q01196 453 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 NSUN5P1Q3KNT7 163 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 HIST2H2BDQ6DRA6 164 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 SHISA2Q6UWI4 295 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 NPVFQ9HCQ7 196 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 UQCC1Q9NVA1 299 aa14.16□□□□□ -0.14
RFFL-211ENST00000584541 RNF222A6NCQ9 220 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 I3L521 148 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 DFFBO76075 338 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 HSPB1P04792 205 aaKnown RBP14.15□□□□□ -0.14
RFFL-211ENST00000584541 ARL3P36405 182 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 OR2F1Q13607 317 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 CLINT1Q14677 625 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 SPSB3Q6PJ21 355 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 C18orf65Q6ZTR6 163 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 C8orf86Q6ZUL3 223 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 TMEM144Q7Z5S9 345 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 DPF1Q92782 380 aa14.15□□□□□ -0.14
RFFL-211ENST00000584541 MRPL36Q9P0J6 103 aaKnown RBP14.15□□□□□ -0.14
RFFL-211ENST00000584541 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms