RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 HBG1P69891 147 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 HBG2P69892 147 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 KIAA0141Q14154 515 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ATP6V1FQ16864 119 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ETFRF1Q6IPR1 90 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 KCNRGQ8N5I3 272 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR1S2Q8NGQ3 325 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 SCARB1Q8WTV0 552 aa12.72□□□□□ -0.37
CDK5RAP3-228ENST00000583363 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 A0A0D9SG52 128 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 RPS10-NUDT3A0A1W2PQS6 291 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 FAM223BA6NKX1 122 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 BOLA2-SMG1P6H3BVE0 249 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OPRK1P41145 380 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 TPPP2P59282 170 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 DLK1P80370 383 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ATP5G2Q06055 141 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 SLC38A11Q08AI6 406 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 ZNF345Q14585 488 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 LAMTOR1Q6IAA8 161 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 LCNL1Q6ZST4 164 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 FAM223AQ8IWN6 122 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 C3orf56Q8N813 242 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 OR5C1Q8NGR4 320 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 VN1R17PQ8TDU5 208 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 USMG5Q96IX5 58 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 WFDC1Q9HC57 220 aa12.71□□□□□ -0.37
CDK5RAP3-228ENST00000583363 IGHV3-48P01763 117 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 DEFA5Q01523 94 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 FOXL1Q12952 345 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 GAMTQ14353 236 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TMUB2Q71RG4 321 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 SLC16A13Q7RTY0 426 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 C9orf62Q8N4C0 152 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 MYOZ3Q8TDC0 251 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 SMIM3Q9BZL3 60 aa12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 MRPL36Q9P0J6 103 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-228ENST00000583363 A0A0G2JLM5 398 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 FNDC10F2Z333 226 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 RPLP1P05386 114 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 HNRNPCP07910 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 VWC2Q2TAL6 325 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TCTEX1D4Q5JR98 221 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ZNF491Q8N8L2 437 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CXorf58Q96LI9 332 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
CDK5RAP3-228ENST00000583363 PKD1L1Q8TDX9 2849 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TAAR5O14804 337 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 MFAP4P55083 255 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CLINT1Q14677 625 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 LILRB2Q8N423 598 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TMEM116Q8NCL8 245 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 OR4X2Q8NGF9 303 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 OR4X1Q8NH49 305 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ZNF502Q8TBZ5 544 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 EEF1AKMT3Q96AZ1 226 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 SLC35E1Q96K37 410 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TMEM147Q9BVK8 224 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 NPVFQ9HCQ7 196 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 C21orf62Q9NYP8 219 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 S4R3C0 116 aa12.68□□□□□ -0.38
CDK5RAP3-228ENST00000583363 DFFBO76075 338 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 FCGR2BP31994 310 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ACSM6Q6P461 480 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TMEM144Q7Z5S9 345 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 NPIPB3Q92617 1050 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TXN2Q99757 166 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ATP5SQ99766 215 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ARL6Q9H0F7 186 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 UQCC1Q9NVA1 299 aa12.67□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TRBV7-1A0A0A6YYK4 115 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 F8W735 103 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 IGHV3-23P01764 117 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CD28P10747 220 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 RND2P52198 227 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ZNF343Q6P1L6 599 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ACY3Q96HD9 319 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 UBE2E2Q96LR5 201 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ATP6V0BQ99437 205 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 ARPC5LQ9BPX5 153 aa12.66□□□□□ -0.38
CDK5RAP3-228ENST00000583363 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 KANTRA0A1W2PQU2 76 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 TCRBV4S1A1TA0A5B7 111 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 SMCO3A2RU48 225 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 BCL2L11O43521 198 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CLN5O75503 358 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 IGHV3-11P01762 117 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CLEC3BP05452 202 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 NPBWR1P48145 328 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 KRTAP10-3P60369 221 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 OPCMLQ14982 345 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 AWAT1Q58HT5 328 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 THAP8Q8NA92 274 aa12.65□□□□□ -0.38
CDK5RAP3-228ENST00000583363 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms