RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TEX36Q5VZQ5 186 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 SIGLECL1Q8N7X8 197 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 OR4C6Q8NH72 309 aa1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 NCOA6Q14686 2063 aaPredicted RBP1.42□□□□□ -2.18
SMARCE1-219ENST00000583294 PIRO00625 290 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 GEMIN2O14893 280 aaKnown RBP1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 CNIH1O95406 144 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 CDC42P60953 191 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 RHEBQ15382 184 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 HIST3H2BBQ8N257 126 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 LINC00311Q8N616 119 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 OR52R1Q8NGF1 315 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 C22orf24Q9Y442 160 aa1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 V9GYY5 206 aaPredicted RBP1.41□□□□□ -2.18
SMARCE1-219ENST00000583294 RIC1Q4ADV7 1423 aa1.4□□□□□ -2.18
SMARCE1-219ENST00000583294 KPNA3O00505 521 aaPredicted RBP1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 RPP14O95059 124 aaKnown RBP1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 TTRP02766 147 aa1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 AESQ08117 197 aa1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 KRT222Q8N1A0 295 aa1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 PPP1R14BQ96C90 147 aa1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 ECM29Q5VYK3 1845 aa1.4□□□□□ -2.19
SMARCE1-219ENST00000583294 ROBO3Q96MS0 1386 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 SMIM10L2AP0DMW4 78 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 SMIM10L2BP0DMW5 78 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 MYL6P60660 151 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 SPANXN5Q5MJ07 72 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 OOSP2Q86WS3 158 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 CMSS1Q9BQ75 279 aaKnown RBP1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 CCDC90BQ9GZT6 254 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 UBAP1Q9NZ09 502 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 EML6Q6ZMW3 1958 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 ZNF106Q9H2Y7 1883 aaKnown RBP1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 COL4A5P29400 1685 aa1.39□□□□□ -2.19
SMARCE1-219ENST00000583294 A0A087WUJ7 227 aa1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 C2orf70A6NJV1 201 aa1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 OR2J2O76002 312 aa1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 COX6A1P12074 109 aa1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 RANP62826 216 aaKnown RBP1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 RNASE10Q5GAN6 216 aaKnown RBP1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 PHF13Q86YI8 300 aaPredicted RBP1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 OSTCQ9NRP0 149 aa1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 PLXND1Q9Y4D7 1925 aa1.38□□□□□ -2.19
SMARCE1-219ENST00000583294 GOLGA6L19H0YKK7 550 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 OR2T1O43869 369 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 TCL1BO95988 128 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 TCRBP04435 133 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 RBP1P09455 135 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 MGST1P10620 155 aaKnown RBP1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 S100A4P26447 101 aaKnown RBP1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 ZNF93P35789 620 aaPredicted RBP1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 SSR2P43308 183 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 LSM6P62312 80 aaKnown RBP1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 C14orf105Q9NVL8 296 aa1.37□□□□□ -2.19
SMARCE1-219ENST00000583294 SMIM9A6NGZ8 99 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 OR1I1O60431 355 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 TRAPPC6BQ86SZ2 158 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 BORCS7Q96B45 105 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 C20orf27Q9GZN8 174 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 DCSTAMPQ9H295 470 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 TAS2R4Q9NYW5 299 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 CYSLTR1Q9Y271 337 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 PLB1Q6P1J6 1458 aa1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 TNRC6BQ9UPQ9 1833 aaKnown RBP1.36□□□□□ -2.19
SMARCE1-219ENST00000583294 A0A087WX48 190 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 TRAV3A0A0B4J244 114 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 hADV38S2A0JD32 116 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 FAM19A2Q8N3H0 131 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 CT55Q8WUE5 264 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 GPR146Q96CH1 333 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 MIXL1Q9H2W2 232 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 PRELID3BQ9Y3B1 194 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 SCN10AQ9Y5Y9 1956 aa1.35□□□□□ -2.19
SMARCE1-219ENST00000583294 hCG_1818297A0A087WSY0 165 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 TRBV6-7A0A0A0MS04 114 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 A8MT66 165 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 UBL3O95164 117 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 SMIM17P0DL12 118 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 MIFP14174 115 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 CDKN2CP42773 168 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 DEFA3P59666 94 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 C12orf74Q32Q52 190 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 GDPD1Q8N9F7 314 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 TRIM4Q9C037 500 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 RNASE7Q9H1E1 156 aaKnown RBP1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 OR51V1Q9H2C8 321 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 UQCC1Q9NVA1 299 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 KLK9Q9UKQ9 250 aa1.34□□□□□ -2.19
SMARCE1-219ENST00000583294 ZFYVE9O95405 1425 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 NEO1Q92859 1461 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 C1orf196B1AJZ1 125 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 SULT1B1O43704 296 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 HYPMO75409 117 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 OR2B3O76000 313 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 BAALC-AS2P0C853 105 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 RAB4BP61018 213 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 PDE6HQ13956 83 aa1.33□□□□□ -2.2
SMARCE1-219ENST00000583294 EDDM3AQ14507 147 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms