RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ERHP84090 104 aaKnown RBP8.11□□□□□ -1.11
SS18-221ENST00000582448 PRCDQ00LT1 54 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 DIAPH2-AS1Q14236 149 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 PLGLAQ15195 96 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 MMD2Q8IY49 270 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 ZNF709Q8N972 641 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 TEX45Q8NA69 505 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 MRAPQ8TCY5 172 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 BSCL2Q96G97 398 aaPredicted RBP8.11□□□□□ -1.11
SS18-221ENST00000582448 TBX15Q96SF7 602 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 TMEM147Q9BVK8 224 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 SIRPDQ9H106 197 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 ARV1Q9H2C2 271 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 WFDC1Q9HC57 220 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 UQCC1Q9NVA1 299 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 KIAA1456Q9P272 454 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 FAM96BQ9Y3D0 163 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
SS18-221ENST00000582448 IGHV3-72A0A0B4J1Y9 119 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 IGHV1-69DA0A0B4J2H0 117 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 TEX50A0A1B0GTY4 177 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 A0A1W2PRD5 423 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 A0A1W2PRF3 423 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 A0A1W2PRM7 423 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 SRRM4A7MD48 611 aaKnown RBP8.1□□□□□ -1.11
SS18-221ENST00000582448 C17orf112F2Z3M2 114 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 SLC25A17O43808 307 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 IGHV1-69P01742 117 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 IL6RP08887 468 aaPredicted RBP8.1□□□□□ -1.11
SS18-221ENST00000582448 SPP1P10451 314 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 NPY1RP25929 384 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 BRS3P32247 399 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 IER3P46695 156 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 CAMLGP49069 296 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 SULT1A2P50226 295 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 SUB1P53999 127 aaKnown RBP eCLIP8.1□□□□□ -1.11
SS18-221ENST00000582448 RAB2AP61019 212 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 RPL15P61313 204 aaKnown RBP8.1□□□□□ -1.11
SS18-221ENST00000582448 PRB3Q04118 309 aaPredicted RBP8.1□□□□□ -1.11
SS18-221ENST00000582448 KRTAP15-1Q3LI76 137 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 C11orf44Q8N8P7 122 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 SLC24A4Q8NFF2 622 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 OR2G3Q8NGZ4 309 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 OR2T10Q8NGZ9 312 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 PCNPQ8WW12 178 aaKnown RBP8.1□□□□□ -1.11
SS18-221ENST00000582448 OR4C12Q96R67 309 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 GGACTQ9BVM4 153 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 PARD6GQ9BYG4 376 aaPredicted RBP8.1□□□□□ -1.11
SS18-221ENST00000582448 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 HILPDAQ9Y5L2 63 aa8.1□□□□□ -1.11
SS18-221ENST00000582448 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 BTBD17A6NE02 478 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 TEX46H3BTG2 121 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 FGF16O43320 207 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 SOX15O60248 233 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 TSPAN9O75954 239 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 MOSP00540 346 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 VDAC2P45880 294 aaPredicted RBP8.09□□□□□ -1.11
SS18-221ENST00000582448 DLX1P56177 255 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 KLRD1Q13241 179 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 HES1Q14469 280 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 SSX2Q16385 188 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 AKR1C8PQ5T2L2 129 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 DPPA3Q6W0C5 159 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 HSD17B13Q7Z5P4 300 aaPredicted RBP8.09□□□□□ -1.11
SS18-221ENST00000582448 MALSU1Q96EH3 234 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 METTL1Q9UBP6 276 aaKnown RBP8.09□□□□□ -1.11
SS18-221ENST00000582448 DKK2Q9UBU2 259 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 FBXO7Q9Y3I1 522 aa8.09□□□□□ -1.11
SS18-221ENST00000582448 UBE2L5PA0A1B0GUS4 154 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 A0A1W2PPI3 338 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 SMCO3A2RU48 225 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 C15orf62A8K5M9 175 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 RNASEK-C17orf49H0YIS7 233 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 OPN1MWP04001 364 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 SNRNP70P08621 437 aaKnown RBP8.08□□□□□ -1.12
SS18-221ENST00000582448 FAM106CPP0CH98 169 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 OPN1MW2P0DN77 364 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 OPN1MW3P0DN78 364 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 ATP6V0CP27449 155 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 DLK1P80370 383 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 SERF2P84101 59 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 ZNF616Q08AN1 781 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 RAB31Q13636 194 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 PSG5Q15238 335 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 MMDQ15546 238 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 TNXAQ16473 311 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 LRRC75BQ2VPJ9 315 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 TMEM182Q6ZP80 229 aaPredicted RBP8.08□□□□□ -1.12
SS18-221ENST00000582448 PPP1R27Q86WC6 154 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 CXorf58Q96LI9 332 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 PSMG3Q9BT73 122 aaPredicted RBP8.08□□□□□ -1.12
SS18-221ENST00000582448 C16orf95Q9H693 158 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 ZNF430Q9H8G1 570 aaPredicted RBP8.08□□□□□ -1.12
SS18-221ENST00000582448 PARP11Q9NR21 331 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 KCNIP2Q9NS61 270 aa8.08□□□□□ -1.12
SS18-221ENST00000582448 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms